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Information on SUBCLASS 3.4.10
Subclass Accession number: 2318
Subclass: 3.4.10 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 3.2 +/- 4.5
Average RMSD (Å) : 0.700 +/- 0.173

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpXpXXX
(φψ)-conformation: aapapaa
Pattern: [FHV]x[AEQ][EQT][STV][DQR]x[LTY]xxxx[FWY]x[GIW][EFK]xx[AR]x[EKR]
Conservation:-0.230-0.3510.4950.6160.1320.495-0.593-0.2300.739-0.835-0.593-0.5933.155-0.110-0.835-0.472-1.319-0.9560.859-0.7141.341
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c1k_A_1701c1k   A174194HDEQTDNLVWNNYSIKLKAYRHHHH---HHHHHHHHHHHHHHaaaabapaaaaaaaaaaaaaa
1h0o_A_1501h0o   A150170FSQEVQVTEARCFYGFQIAMEHHHH---HHHHHHHHHHHHHHaaaaxaxaaaaaaaaaaaaaa
1o8a_A_1641o8a   A168188VMATSRKYEDLLWAWEGWRDKHHHH---HHHHHHHHHHHHHHaaaaxabaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h0o_A_1501h0o   A     COCOBALT (II) ION Q - 166
1h0o_A_1501h0o   A     COCOBALT (II) ION E - 170
1h0o_A_1501h0o   A     COCOBALT (II) ION H - 173
1o8a_A_1641o8a   A     NAGN-ACETYL-D-GLUCOSAMINE W - 180
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0o_A_1501h0o   A CO1CO BINDING SITE FOR CHAIN AQ - 166
1h0o_A_1501h0o   A CO1CO BINDING SITE FOR CHAIN AE - 170
1o8a_A_1641o8a   A CL1CL BINDING SITE FOR CHAIN AR - 186

Clusters included in this Subclass
CLUSTER: HH.2.190