Information on SUBCLASS 3.6.9 |
Subclass Accession number: 2335
Subclass: 3.6.9 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 10.4 +/- 10.8 Average RMSD (Å) : 1.000 +/- 0.300 Consensus geometry
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Consensus Sequence: | XXXXpXX |
(φψ)-conformation: | aapabaa |
Pattern: | [AKR] | [AIK] | x | [GKT] | x | x | [IK] | [DET] | x | x | x | x | [K] | [AE] | x | x |
Conservation: | 0.319 | -0.742 | -0.646 | -0.453 | -0.453 | -0.164 | 0.079 | 0.511 | -0.549 | -0.164 | -0.839 | -0.549 | 3.308 | 0.861 | -0.453 | -0.067 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aa7_A_90 | 1aa7 | A | 101 | 116 | RKLKREITFHGAKEIS | HHHTT--SHHHHHHHH | aaaaaxabaaaaaaaa |
1mqv_A_75 | 1mqv | A | 91 | 106 | AAQGTIKDEASLKANI | HHHHH--SHHHHHHHH | aaaaaxabaaaaaaaa |
2fok_A_41 | 2fok | A | 41 | 56 | KIPTLVKESKIQKELV | HHHHH--SHHHHHHHH | aaaaabapaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | K - 77 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 78 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | D - 79 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 81 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 82 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 85 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 109 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 110 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | N - 112 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | C - 113 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | K - 114 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | C - 116 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 117 |
1mqv_A_75 | 1mqv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 120 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1aa7_A_90 | 1aa7 | A | S1RNA-BINDING SITE. | K - 95 |
1aa7_A_90 | 1aa7 | A | S1RNA-BINDING SITE. | K - 98 |
1aa7_A_90 | 1aa7 | A | S1RNA-BINDING SITE. | R - 101 |
1aa7_A_90 | 1aa7 | A | S1RNA-BINDING SITE. | K - 102 |
1aa7_A_90 | 1aa7 | A | S1RNA-BINDING SITE. | R - 105 |
Clusters included in this Subclass |
CLUSTER: HH.4.186 |