Logo
Information on SUBCLASS 4.9.1
Subclass Accession number: 2390
Subclass: 4.9.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 25 (>75 %)  3 (>75 %)  4 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0005524 (>75 %)  GO:0008233 (>75 %)  GO:0009377 (>75 %)  GO:0030554 (>75 %)  
SCOP : 56234 (>75 %)  56235 (>75 %)  56251 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 7.7 +/- 10.2
Average RMSD (Å) : 1.129 +/- 0.287

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXXhXXX
(φψ)-conformation: aappppaa
Pattern: [deqy][deqrw]x[aekq]x[agstv][aegrs][ALPV][DNPST][eprs]xx[AKMV]xx[afltv]
Conservation:0.3320.219-1.5571.091-1.147-0.011-0.4441.3261.3691.149-1.568-0.1601.082-0.835-0.264-0.583
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1csh_*_1041csh   -113128EWAKRAALPSHVVTMLHHHHH----HHHHHHHaaaaaxbbxaaaaaaa
1cv8_*_571cv8   -5873QQFQFTGLTPREMIYFHHHHH----HHHHHHHaaaaaxxbxaaaaaaa
1gde_A_31gde   A520DRLELVSASEIRKLFDHHHHHS---HHHHHHHaaaaaxxxxaaaaaaa
1jj2_1_51jj2   11429LDNQNSRVPAWVMLKTHHHHTS---HHHHHHHaaaaaxxxwaaaaaaa
1jms_A_2961jms   A296311YEDLVSCVNRPEAEAVHHHHHS-B-HHHHHHHaaaaaxpbxaaaaaaa
1rcw_A_1031rcw   A104119EELEAHEPSEAAKAKVHHHHH----HHHHHHHaaaaapxpxaaaaaaa
1rxw_A_1161rxw   A119134YAQAAGRVDEYIVDSAHHHHH----HHHHHHHaaaaaxbxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE F - 62
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE T - 63
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE G - 64
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE L - 65
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE T - 66
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE P - 67
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE E - 69
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE M - 70
1gde_A_31gde   A     GLUGLUTAMIC ACID I - 15
1jj2_1_51jj2   1     MGMAGNESIUM ION D - 15
1rcw_A_1031rcw   A     MSESELENOMETHIONINE K - 118
1rcw_A_1031rcw   A     MSESELENOMETHIONINE V - 119
1rcw_A_1031rcw   A     MSESELENOMETHIONINE A - 120
1rcw_A_1031rcw   A     MSESELENOMETHIONINE T - 121

Clusters included in this Subclass
CLUSTER: HH.3.136
CLUSTER: HH.4.153