Logo
Information on SUBCLASS 4.21.1
Subclass Accession number: 2411
Subclass: 4.21.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.3 (>75 %)  1.3.99 (>75 %)  
GO : GO:0003700 (>75 %)  GO:0003707 (>75 %)  GO:0003995 (>75 %)  GO:0004872 (>75 %)  GO:0004879 (>75 %)  GO:0016627 (>75 %)  
SCOP : 47203 (>75 %)  47204 (>75 %)  47363 (>75 %)  48507 (>75 %)  48508 (>75 %)  48509 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 11.0 +/- 14.3
Average RMSD (Å) : 0.660 +/- 0.055

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: phpcXppX
(φψ)-conformation: aapgppaa
Pattern: x[ehwy]x[AFL][ESW][AKNRT][ekqs][glvy][EK][EGN][AKLT][DGNST][ekry][AEGQ][DGV][AFKL][kmqr][AKLT]xxx
Conservation:-0.554-0.322-0.0810.2370.527-0.057-0.269-1.4353.0891.761-0.4270.367-0.4810.2240.511-0.7940.420-0.382-1.276-0.048-1.011
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hb6_A_491hb6   A5474KWDAWNELKGTSKEDAMKAYIHHHHHHHTTT--HHHHHHHHHaaaaaaaapgxxaaaaaaaaa
1hbk_A_511hbk   A5676KYEAWKSVENLNREDAQKRYVHHHHHHHTTT--HHHHHHHHHaaaaaaaapvxxaaaaaaaaa
1i6l_A_2531i6l   A253273IEELERQYEGKGYGVFKADLAHHHHHHHTTT--HHHHHHHHHaaaaaaaapvxxaaaaaaaaa
1ihu_A_3871ihu   A396416QHVLETKGKELDEAGKRLLEEHHHHHHHHTT--HHHHHHHHHaaaaaaaapvxxaaaaaaaaa
1m9f_C_361m9f   C3757IPMFSALSEGATPQDLNTMLNHHHHHHH-TT--HHHHHHHHHaaaaaaaapvxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hbk_A_511hbk   A     COACOENZYME A I - 52
1hbk_A_511hbk   A     MYRMYRISTIC ACID I - 52
1hbk_A_511hbk   A     COACOENZYME A D - 53
1hbk_A_511hbk   A     COACOENZYME A K - 56
1hbk_A_511hbk   A     MYRMYRISTIC ACID K - 56
1hbk_A_511hbk   A     COACOENZYME A W - 60
1hbk_A_511hbk   A     COACOENZYME A Y - 75
1hbk_A_511hbk   A     MYRMYRISTIC ACID Y - 75
1i6l_A_2531i6l   A     MSESELENOMETHIONINE R - 286
1i6l_A_2531i6l   A     MSESELENOMETHIONINE Y - 287
1i6l_A_2531i6l   A     GOLGLYCEROL Y - 287
1i6l_A_2531i6l   A     MSESELENOMETHIONINE H - 288
1i6l_A_2531i6l   A     MSESELENOMETHIONINE H - 289
1ihu_A_3871ihu   A     CDCADMIUM ION P - 387
1ihu_A_3871ihu   A     CDCADMIUM ION H - 388
1ihu_A_3871ihu   A     CDCADMIUM ION E - 389
1ihu_A_3871ihu   A     CDCADMIUM ION H - 397
1ihu_A_3871ihu   A     CDCADMIUM ION T - 401
1ihu_A_3871ihu   A     CDCADMIUM ION E - 416
1ihu_A_3871ihu   A     CDCADMIUM ION D - 417

Clusters included in this Subclass
CLUSTER: HH.4.252
CLUSTER: HH.5.183
CLUSTER: HH.6.152