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Information on SUBCLASS 5.2.2
Subclass Accession number: 2439
Subclass: 5.2.2 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.1
GO : GO:0004553 (>75 %)  GO:0005509 (>75 %)  GO:0016160 (>75 %)  GO:0016798 (>75 %)  
SCOP : 51350 (>75 %)  51445 (>75 %)  51446 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 11.6 +/- 12.4
Average RMSD (Å) : 0.860 +/- 0.182

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXpPphXXX
(φψ)-conformation: aabaappaa
Pattern: [ilv][AEQR][ENQR][LTVY]x[AEQS]x[CNSY][KP][DGNRS][AIL][fit][AEQ][egks][AEGQT][ailv]x[DEHKR][AKR]
Conservation:0.236-0.0000.759-0.154-0.8480.446-1.214-0.3813.284-0.2540.756-0.7140.490-0.922-0.672-0.588-0.8580.1630.472
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
12as_A_17012as   A170188SQELLSRYPDLDAKGRERAHHHHHHHSSSS-HHHHHHHaaaaaaabaaxxaaaaaaa
1f5a_A_2531f5a   A253271VARTCQLYPNAIASTLVHKHHHHHHHSTT--HHHHHHHaaaaaaabaaxbaaaaaaa
1js3_A_1481js3   A164182VRRLQAASPGLTQGAVLEKHHHHHHHSTT--HHHHHHHaaaaaaabaaxxaaaaaaa
1kjw_A_6551kjw   A655673LENVLEINKRITEEQARKAHHHHHHH-TTS-HHHHHHHaaaaaaabaabxaaaaaaa
6pax_A_786pax   A84102IAQYKQECPSIFAWEIRDRHHHHHHH-TT--HHHHHHHaaaaaaabaaxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f5a_A_2531f5a   A     MSESELENOMETHIONINE V - 253
1f5a_A_2531f5a   A     MSESELENOMETHIONINE A - 254
1f5a_A_2531f5a   A     MSESELENOMETHIONINE R - 255
1f5a_A_2531f5a   A     MSESELENOMETHIONINE T - 256
1f5a_A_2531f5a   A     MSESELENOMETHIONINE F - 276
1js3_A_1481js3   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 148
1js3_A_1481js3   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 149
1js3_A_1481js3   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 150
1js3_A_1481js3   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 152

Clusters included in this Subclass
CLUSTER: HH.4.258
CLUSTER: HH.6.32