Information on SUBCLASS 5.6.1 |
Subclass Accession number: 2451
Subclass: 5.6.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 15.8 +/- 15.8 Average RMSD (Å) : 0.842 +/- 0.223 Consensus geometry
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Consensus Sequence: | XXGXphpXp |
(φψ)-conformation: | aagbbppaa |
Pattern: | x | x | x | [adkqst] | [DGS] | x | [dknrwy] | [ALPTV] | [dkpst] | x | [degps] | [egqrt] | [ailvw] | x |
Conservation: | -0.293 | -0.971 | -0.583 | -0.037 | 3.114 | -0.138 | -0.299 | 0.635 | 0.431 | -0.672 | -0.078 | -0.073 | -0.178 | -0.859 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eaf_*_454 | 1eaf | - | 457 | 470 | AKKAGVKLTVLPLL | HHHTT----HHHHH | aaaavbbbbaaaaa |
1ezv_A_382 | 1ezv | A | 393 | 406 | VLIKGSKLSLGEAF | HHHHSS---HHHHH | aaaavbbxxaaaaa |
1hl2_A_140 | 1hl2 | A | 140 | 153 | PARSGVKLTLDQIN | HHHH-----HHHHH | aaaavxxxxaaaaa |
1hr6_B_391 | 1hr6 | B | 402 | 415 | VVTTGKRLSPEEVF | HHHHSS---HHHHH | aaaavbbxxaaaaa |
1l0l_B_375 | 1l0l | B | 386 | 399 | ALAAGSYTPPSTVL | HHHHSS---HHHHH | aaaavbbbxaaaaa |
1mn8_A_16 | 1mn8 | A | 23 | 36 | AHNQSVDVKKRRWV | HHHTT----HHHHH | aaaavbbbxaaaaa |
1nqk_A_113 | 1nqk | A | 116 | 129 | LAGDGVFLDHSERY | HHHHT----TTHHH | aaaagbbbxaaaaa |
1o5k_A_135 | 1o5k | A | 135 | 148 | PGRTGVNVLPETAA | HHHHS----HHHHH | aaaavbbxxaaaaa |
1on3_A_206 | 1on3 | A | 210 | 223 | KSVTGEDVTADELG | HHHH-----HHHHH | aaaavxbbxaaaaa |
1r4v_A_29 | 1r4v | A | 37 | 50 | RTELDIDLTDETIE | HHHH-----HHHHH | aaaavbxxbaaaaa |
1rhc_A_109 | 1rhc | A | 113 | 126 | VPVTGEWPSVPVRQ | HHHH-----HHHHH | aaaavbbwxaaaaa |
1rzh_M_243 | 1rzh | M | 253 | 266 | RWTMGFNATMEGIH | HHHHS----TTHHH | aaaavbbbbaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.5.27 |
CLUSTER: HH.6.17 |