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Information on SUBCLASS 5.11.1
Subclass Accession number: 2457
Subclass: 5.11.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.3 (>75 %)  1.3.99 (>75 %)  1.3.99.1 (>75 %)  
GO : GO:0000104 (>75 %)  GO:0016627 (>75 %)  GO:0016829 (>75 %)  
SCOP : 51904 (>75 %)  51905 (>75 %)  51934 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 8.8 +/- 10.4
Average RMSD (Å) : 1.071 +/- 0.281

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXXhXhpXX
(φψ)-conformation: aalbbppaa
Pattern: xx[acilpv]x[agkr]x[CFIL]xxx[GNRS][ailv]x[FLPV][DEGNS][kpqr]x[afil]x
Conservation:-0.917-0.993-0.750-1.4190.171-0.5912.1360.378-0.158-0.6781.3540.432-0.189-0.0302.0890.631-0.7820.082-0.766
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d7y_A_3711d7y   A374392FAPLRRLLAVGAKPDRAALHHHHHHHHHTT----HHHHaaaaaaaaaavpbxxaaaa
1fx8_A_71fx8   A2644VGCVAALKVAGASFGQWEIHHHHHHHHHS-----HHHHaaaaaaaaaavxxbxaaaa
1h16_A_1161h16   A116134KMIEGSCKAYNRELDPMIKHHHHHHHHHTT----HHHHaaaaaaaaaalbbxxaaaa
1iom_A_2861iom   A296314EEAGKVLNPRGIYPNVDFYHHHHHHHTTTT--B-HHHHaaaaaaaaaavbbxxaaaa
1k20_A_1211k20   A123141SIVYRMFKEHSVAVSKEIAHHHHHHHHHTT----HHHHaaaaaaaaaalbxbxaaaa
1m2r_A_2511m2r   A252270DGLNVYLNKYRIELDPQLEHHHHHHHHHTT----HHHHaaaaaaaaaalbbxxaaaa
1q1r_A_3801q1r   A383401FNQSKQIITDRLPVEPNLLHHHHHHHHHTT----HHHHaaaaaaaaaalxwxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fx8_A_71fx8   A     CRYPROPANE-1,2,3-TRIOL L - 21
1fx8_A_71fx8   A     CRYPROPANE-1,2,3-TRIOL Q - 41
1fx8_A_71fx8   A     CRYPROPANE-1,2,3-TRIOL W - 48
1fx8_A_71fx8   A     CRYPROPANE-1,2,3-TRIOL G - 49
1fx8_A_71fx8   A     CRYPROPANE-1,2,3-TRIOL V - 52
1fx8_A_71fx8   A     CRYPROPANE-1,2,3-TRIOL I - 56
1h16_A_1161h16   A     COACOENZYME A K - 116
1h16_A_1161h16   A     COACOENZYME A M - 117
1h16_A_1161h16   A     DTLD-TREITOL Y - 125
1iom_A_2861iom   A     GOLGLYCEROL N - 310
1iom_A_2861iom   A     GOLGLYCEROL V - 311
1iom_A_2861iom   A     GOLGLYCEROL D - 312
1iom_A_2861iom   A     GOLGLYCEROL S - 315
1k20_A_1211k20   A     MNMANGANESE (II) ION A - 121
1k20_A_1211k20   A     MNMANGANESE (II) ION S - 122
1k20_A_1211k20   A     MNMANGANESE (II) ION G - 147
1k20_A_1211k20   A     GOLGLYCEROL S - 150
1k20_A_1211k20   A     MNMANGANESE (II) ION D - 151
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h16_A_1161h16   A COACOA BINDING SITE FOR CHAIN AK - 116
1h16_A_1161h16   A COACOA BINDING SITE FOR CHAIN AM - 117
1h16_A_1161h16   A DT1DTL BINDING SITE FOR CHAIN AT - 138
1h16_A_1161h16   A DT1DTL BINDING SITE FOR CHAIN AE - 139

Clusters included in this Subclass
CLUSTER: HH.7.9