ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.14.1

Subclass Accession number: 2461
Subclass: 5.14.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 4.4 (>75 %)  4.4.1 (>75 %)
GO : GO:0005489 (>75 %)  GO:0016829 (>75 %)  GO:0016846 (>75 %)
SCOP : 46625 (>75 %)  46626 (>75 %)  46627 (>75 %)  53382 (>75 %)  53383 (>75 %)  53402 (>75 %)

Number of loops: 2

Average sequence ID (%) : 30.4 +/- 0.0
Average RMSD (Å) : 0.600 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 45-90

theta (°): 90-135

rho (°): 45-90

Consensus Sequence:	ppGhLhDhX
(φψ)-conformation:	aalapppaa

Pattern:	[L]	[AQ]	[EK]	[AL]	[KQ]	[RS]	[DQ]	[G]	[AL]	[L]	[PV]	[D]	[CY]	[GT]	[T]	[S]	[AQ]	[EQ]	[IK]	[EL]	x	[GR]	[L]
Conservation:	0.774	-0.683	0.127	-0.844	0.127	-0.683	-0.035	2.069	-0.844	0.774	-0.683	2.069	0.127	-0.683	1.421	0.774	-0.683	0.450	-1.330	-1.330	-1.006	-0.683	0.774

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1oaa_*_217	1oaa	-	223	245	LQKLKSDGALVDCGTSAQKLLGL	HHHHHHTT-SB-HHHHHHHHHHH	aaaaaaavaxbxaaaaaaaaaaa
1ofn_A_176	1ofn	A	176	198	LAEAQRQGLLPDYTTSQEIERRL	HHHHHHTT-S-BHHHHHHHHHHH	aaaaaaavaxxxaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1oaa_*_217	1oaa	*	OAAOXALOACETATE ION	L - 223
1oaa_*_217	1oaa	*	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	C - 235

Clusters included in this Subclass

CLUSTER: HH.6.128