ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.15.1

Subclass Accession number: 2462
Subclass: 5.15.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.11 (>75 %)  1.11.1 (>75 %)  1.11.1.7 (>75 %)  2.7 (>50 %)  2.7.1 (>50 %)  2.7.1.37
GO : GO:0004601 (>75 %)  GO:0004672 (>75 %)  GO:0005515 (>75 %)  GO:0005524 (>75 %)  GO:0016301 (>75 %)  GO:0016684 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)
SCOP : 48112 (>75 %)  48113 (>75 %)  48114 (>75 %)  56111 (>75 %)  56112 (>75 %)  88854 (>75 %)

Number of loops: 6

Average sequence ID (%) : 31.6 +/- 24.1
Average RMSD (Å) : 0.583 +/- 0.194

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	hXXpXXXXp
(φψ)-conformation:	aalbpbbaa

Pattern:	[IP]	[EN]	[imtv]	[hilv]	[adenr]	[gqr]	[DEKR]	[eps]	[hlvy]	[DGS]	[aefkl]	[ekry]	[ADSTV]	[D]	[CLMV]	[EWY]	[AS]	[IL]	[G]	[hv]	[ILV]	[ACFGLT]	[MY]	x	[FLV]	[L]	[crst]
Conservation:	0.759	0.789	-0.608	-0.727	-1.095	-0.756	-0.116	-0.587	-0.855	-0.146	-1.141	-0.684	-0.805	2.320	-0.110	0.984	0.415	0.664	2.320	-0.559	0.460	-1.156	1.195	-0.800	-0.053	1.213	-0.919

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a06_*_187	1a06	-	187	213	PEVLAQKPYSKAVDCWSIGVIAYILLC	HHHHTT----THHHHHHHHHHHHHHHH	aaaaalbpxbaaaaaaaaaaaaaaaaN
1csn_*_187	1csn	-	187	213	INTHLGREQSRRDDLEALGHVFMYFLR	HHHHTT----HHHHHHHHHHHHHHHHH	aaaaavxpxbaaaaaaaaaaaaaaaaa
1jks_A_186	1jks	A	186	212	PEIVNYEPLGLEADMWSIGVITYILLS	HHHHTT--B-THHHHHHHHHHHHHHHH	aaaaalbwbbaaaaaaaaaaaaaaaaa
1kob_A_219	1kob	A	219	245	PEIVDREPVGFYTDMWAIGVLGYVLLS	HHHHTT--B-HHHHHHHHHHHHHHHHH	aaaaalbxbbaaaaaaaaaaaaaaaaN
1mq4_A_298	1mq4	A	298	324	PEMIEGRMHDEKVDLWSLGVLCYEFLV	HHHHTT--B-THHHHHHHHHHHHHHHH	aaaaavxxbbaaaaaaaaaaaaaaaaa
1o6y_A_185	1o6y	A	185	211	PEQARGDSVDARSDVYSLGCVLYEVLT	HHHHTT----HHHHHHHHHHHHHHHHH	aaaaalxxbbaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mq4_A_298	1mq4	A	PO4PHOSPHATE ION	M - 300

Clusters included in this Subclass