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Information on SUBCLASS 5.23.1
Subclass Accession number: 2470
Subclass: 5.23.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005524 (>75 %)  GO:0016829 (>75 %)  
SCOP : 48149 (>75 %)  48150 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 12.9 +/- 13.0
Average RMSD (Å) : 1.400 +/- 0.469

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpXXLXDph
(φψ)-conformation: aabpbapaa
Pattern: [GLV]xxx[ALW]x[ERTY]x[DEPR][LY]xx[EKPR]xxx[EMR][ADG][AR]xxx
Conservation:-0.610-0.503-0.588-0.419-0.218-1.176-0.756-1.0080.0011.810-0.1991.9820.422-1.344-0.503-0.4190.4780.8931.5481.392-1.2600.478
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ewq_A_2821ewq   A287308LLQSWLRHPLLDRGPLEARLDRHHHHHHHS----HHHHHHHHHHaaaaaaabxxaxaaaaaaaaaa
1kp8_A_531kp8   A5374GVSVAREIELEDKFENMGAQMVHHHHHHH---SSHHHHHHHHHHaaaaaaaxbbaxaaaaaaaaaa
1rlr_*_4781rlr   -489510LDALLDYQDYPIPAAKRGAMGRHHHHHHHS--SSHHHHHHHHHHaaaaaaaxxbabaaaaaaaaaa
2sqc_A_3752sqc   A381402VVWALNTLRLPDERRRRDAMTKHHHHHTT---S-HHHHHHHHHHaaaaaaabbbabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ewq_A_2821ewq   A     MSESELENOMETHIONINE R - 293
1ewq_A_2821ewq   A     EDO1,2-ETHANEDIOL R - 293
1ewq_A_2821ewq   A     MSESELENOMETHIONINE H - 294
1ewq_A_2821ewq   A     EDO1,2-ETHANEDIOL H - 294
1ewq_A_2821ewq   A     MSESELENOMETHIONINE P - 295
1ewq_A_2821ewq   A     MSESELENOMETHIONINE L - 296
1ewq_A_2821ewq   A     MSESELENOMETHIONINE L - 297
1kp8_A_531kp8   A     ATPADENOSINE-5'-TRIPHOSPHATE G - 53
1kp8_A_531kp8   A     KO4POTASSIUM ION, 4 WATERS COORDINATED G - 53
1kp8_A_531kp8   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 54
1kp8_A_531kp8   A     KO4POTASSIUM ION, 4 WATERS COORDINATED V - 54
1kp8_A_531kp8   A     ATPADENOSINE-5'-TRIPHOSPHATE N - 82
2sqc_A_3752sqc   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE C - 376
2sqc_A_3752sqc   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE D - 377

Clusters included in this Subclass
CLUSTER: HH.4.261
CLUSTER: HH.6.137