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Information on SUBCLASS 6.7.1
Subclass Accession number: 2493
Subclass: 6.7.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 11.1 +/- 11.3
Average RMSD (Å) : 0.940 +/- 0.167

Consensus geometry
d (Å): 19 delta (°): 135-180 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXchXhhpXX
(φψ)-conformation: aalbppppaa
Pattern: [ekl]xx[ACS][EMQ][aer]x[cgn][el][epr][psv]x[DNSV]xx[DEQST][fl][GLW][DEKS]
Conservation:-0.568-0.897-0.4361.9892.069-0.641-0.955-0.3520.5070.147-0.071-1.5210.288-1.301-0.8400.6590.4260.4461.053
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dp7_P_191dp7   P2745LLHSQEQKLEPVNAASFGKHHHHHHTT-----HHHHHHaaaaaaalbxxxxaaaaaa
1ekf_A_931ekf   A101119LRSAMRLCLPSFDKLELLEHHHHHHTT-----HHHHHHaaaaaaalxpxbxaaaaaa
1eov_A_2151eov   A215233EAEAEAAGLPVVNLDTRLDHHHHHHTT-----HHHHHHaaaaaaavxxbxxaaaaaa
1eu1_A_5341eu1   A546564VKQAEFKNVAMPSFEDFWSHHHHHHTT-----HHHHHHaaaaaaalbxbwxaaaaaa
1fnn_A_3101fnn   A318336KIVCEEYGERPRVHSQLWSHHHHHHTT-----HHHHHHaaaaaaavbxxxxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dp7_P_191dp7   P     EDO1,2-ETHANEDIOL S - 49
1dp7_P_191dp7   P     EDO1,2-ETHANEDIOL V - 50
1ekf_A_931ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 96
1ekf_A_931ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 99
1eu1_A_5341eu1   A     GLCGLUCOSE E - 565

Clusters included in this Subclass
CLUSTER: HH.8.3