Logo
Information on SUBCLASS 1.2.1
Subclass Accession number: 25
Subclass: 1.2.1
Type: EH beta-alpha
DB: ArchDB-KI
Number of loops: 8

Average sequence ID (%) : 43.4 +/- 3.8
Average RMSD (Å) : 0.91 +/- 0.45

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: IGGhX
(φψ)-conformation: bbeaa
Pattern: {ILV}[AILV][FI][G][G]{AG}xx{AFY}{QT}[AFV]{ALV}[AEK]{AK}
Conservation:-0.304-0.0950.3582.2122.212-0.190-1.127-0.391-0.762-0.205-0.531-0.618-0.070-0.489
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
16pk_*_23616pk   -237250LLIGGAMAYTFLKAEEE-TTHHHHHHHHbbbbeaaaaaaaaa
1php_*_2141php   -215228LIIGGGLAYTFVKAEEE-TTHHHHHHHHbbbbeaaaaaaaaa
1php_*_3451php   -346359SVIGGGDSAAAVEKEEE-SHHHHHHHHHbbbbeaaaaaaaaa
1qpg_*_2301qpg   -231244IIIGGGMAFTFKKVEEE-GGGHHHHHHHbbbbeaaaaaaaaa
1qpg_*_3651qpg   -366379VIIGGGDTATVAKKEEE--HHHHHHHHHbbxbbaaaaaaaaa
1rkd_*_361rkd   -3851VAFGGKGANQAVAAEEEE-HHHHHHHHHbbxbeaaaaaaaaa
1vpe_*_2141vpe   -215228ILIGGAMMFTFLKAEEE-TTTHHHHHHHbxbbeaaaaaaaaa
3pgk_*_3663pgk   -366379VIIGGGDTATVAKKEEE-SSHHHHHHHHbbbbEaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
16pk_*_23616pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 240
16pk_*_23616pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 241
16pk_*_23616pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER A - 242
16pk_*_23616pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER Y - 245
1php_*_2141php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 218
1php_*_2141php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 219
1php_*_2141php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 220
1php_*_2141php   *     ADPADENOSINE-5'-DIPHOSPHATE L - 221
1php_*_2141php   *     ADPADENOSINE-5'-DIPHOSPHATE Y - 223
1php_*_3451php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 349
1php_*_3451php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 350
1php_*_3451php   *     MGMAGNESIUM ION G - 350
1php_*_3451php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 351
1php_*_3451php   *     MGMAGNESIUM ION G - 351
1php_*_3451php   *     ADPADENOSINE-5'-DIPHOSPHATE D - 352
1php_*_3451php   *     MGMAGNESIUM ION D - 352
1php_*_3451php   *     ADPADENOSINE-5'-DIPHOSPHATE S - 353
1php_*_3451php   *     MGMAGNESIUM ION S - 353
1php_*_3451php   *     ADPADENOSINE-5'-DIPHOSPHATE A - 354
1qpg_*_2301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 234
1qpg_*_2301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 235
1qpg_*_2301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 236
1qpg_*_2301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE M - 237
1qpg_*_2301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE F - 239
1qpg_*_3651qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 369
1qpg_*_3651qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 370
1qpg_*_3651qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 371
1qpg_*_3651qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE D - 372
1qpg_*_3651qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE T - 373
1qpg_*_3651qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE A - 374
1rkd_*_361rkd   *     PO4PHOSPHATE ION Y - 36
1rkd_*_361rkd   *     PO4PHOSPHATE ION V - 38
1rkd_*_361rkd   *     RIBRIBOSE F - 40
1rkd_*_361rkd   *     RIBRIBOSE G - 41
1rkd_*_361rkd   *     RIBRIBOSE G - 42
1rkd_*_361rkd   *     RIBRIBOSE K - 43
1rkd_*_361rkd   *     PO4PHOSPHATE ION K - 43
1rkd_*_361rkd   *     RIBRIBOSE N - 46
1vpe_*_2141vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 218
1vpe_*_2141vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 219
1vpe_*_2141vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 220
1vpe_*_2141vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER M - 222
1vpe_*_2141vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER F - 223
3pgk_*_3663pgk   *     ATPADENOSINE-5'-TRIPHOSPHATE G - 370
3pgk_*_3663pgk   *     MP33-PHOSPHOGLYCERIC ACID G - 370
3pgk_*_3663pgk   *     ATPADENOSINE-5'-TRIPHOSPHATE G - 371
3pgk_*_3663pgk   *     MGMAGNESIUM ION G - 371
3pgk_*_3663pgk   *     MP33-PHOSPHOGLYCERIC ACID G - 371
3pgk_*_3663pgk   *     ATPADENOSINE-5'-TRIPHOSPHATE D - 372
3pgk_*_3663pgk   *     MGMAGNESIUM ION D - 372
3pgk_*_3663pgk   *     MP33-PHOSPHOGLYCERIC ACID D - 372
3pgk_*_3663pgk   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 373
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1rkd_*_361rkd   * RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE.G - 42
1rkd_*_361rkd   * RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE.K - 43
1rkd_*_361rkd   * RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE.N - 46

Clusters included in this Subclass
CLUSTER: EH.2.1
CLUSTER: EH.3.8