Information on SUBCLASS 1.2.1 |
Subclass Accession number: 25
Subclass: 1.2.1 Type: EH beta-alpha DB: ArchDB-KI |
Number of loops: 8 Average sequence ID (%) : 43.4 +/- 3.8 Average RMSD (Å) : 0.91 +/- 0.45 Consensus geometry
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Consensus Sequence: | IGGhX |
(φψ)-conformation: | bbeaa |
Pattern: | {ILV} | [AILV] | [FI] | [G] | [G] | {AG} | x | x | {AFY} | {QT} | [AFV] | {ALV} | [AEK] | {AK} |
Conservation: | -0.304 | -0.095 | 0.358 | 2.212 | 2.212 | -0.190 | -1.127 | -0.391 | -0.762 | -0.205 | -0.531 | -0.618 | -0.070 | -0.489 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
16pk_*_236 | 16pk | - | 237 | 250 | LLIGGAMAYTFLKA | EEE-TTHHHHHHHH | bbbbeaaaaaaaaa |
1php_*_214 | 1php | - | 215 | 228 | LIIGGGLAYTFVKA | EEE-TTHHHHHHHH | bbbbeaaaaaaaaa |
1php_*_345 | 1php | - | 346 | 359 | SVIGGGDSAAAVEK | EEE-SHHHHHHHHH | bbbbeaaaaaaaaa |
1qpg_*_230 | 1qpg | - | 231 | 244 | IIIGGGMAFTFKKV | EEE-GGGHHHHHHH | bbbbeaaaaaaaaa |
1qpg_*_365 | 1qpg | - | 366 | 379 | VIIGGGDTATVAKK | EEE--HHHHHHHHH | bbxbbaaaaaaaaa |
1rkd_*_36 | 1rkd | - | 38 | 51 | VAFGGKGANQAVAA | EEEE-HHHHHHHHH | bbxbeaaaaaaaaa |
1vpe_*_214 | 1vpe | - | 215 | 228 | ILIGGAMMFTFLKA | EEE-TTTHHHHHHH | bxbbeaaaaaaaaa |
3pgk_*_366 | 3pgk | - | 366 | 379 | VIIGGGDTATVAKK | EEE-SSHHHHHHHH | bbbbEaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1rkd_*_36 | 1rkd | * | RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE. | G - 42 |
1rkd_*_36 | 1rkd | * | RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE. | K - 43 |
1rkd_*_36 | 1rkd | * | RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE. | N - 46 |
Clusters included in this Subclass |
CLUSTER: EH.2.1 |
CLUSTER: EH.3.8 |