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Information on SUBCLASS 0.1.25
Subclass Accession number: 25
Subclass: 0.1.25 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.113
GO : GO:0003677 (>75 %)  GO:0003700 (>75 %)  GO:0003707 (>75 %)  GO:0004553 (>50 %)  GO:0004872 (>75 %)  GO:0004879 (>75 %)  GO:0005509 (>50 %)  GO:0015923 (>50 %)  GO:0016798 (>50 %)  
SCOP : 48207 (>50 %)  48225 (>50 %)  48226 (>50 %)  48507 (>75 %)  48508 (>75 %)  48509 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 14.8 +/- 14.1
Average RMSD (Å) : 0.450 +/- 0.058

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: phhX
(φψ)-conformation: aabb
Pattern: [LMW]x[R]xx[EKPR]x[FIL][AKNT]
Conservation:0.336-1.0922.277-0.318-0.899-0.046-0.4340.531-0.356
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1af7_*_2381af7   -245253LRRFVPLLKHHHHGGGEEaaaaaaaxx
1idp_A_351idp   A3543WDRLRKVIAHHHHHTTEEaaaaaaaxx
1ie9_A_2561ie9   A272280MLRSNESFTHHHGGGTEEaaaaaaaxb
1nq7_A_2881nq7   A304312LVRMCRAFNHHHHGGGEEaaaaaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1af7_*_2381af7   *     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 244
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL I - 268
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL V - 270
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL I - 271
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL M - 272
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL R - 274
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL S - 275
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL N - 276
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL E - 277
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL S - 278
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL F - 279
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID L - 300
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID E - 301
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID V - 303
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID L - 304
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID R - 306
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID M - 307
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID R - 309
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID A - 310

Clusters included in this Subclass
CLUSTER: HE.3.133
CLUSTER: HE.4.198