Logo
Information on SUBCLASS 3.13.2
Subclass Accession number: 250
Subclass: 3.13.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003906 (>75 %)  GO:0004518 (>75 %)  GO:0004519 (>75 %)  GO:0004536 (>75 %)  GO:0008270 (>75 %)  GO:0016788 (>75 %)  GO:0016798 (>75 %)  GO:0016799 (>75 %)  GO:0016829 (>75 %)  GO:0016835 (>75 %)  GO:0019104 (>75 %)  GO:0046914 (>75 %)  
SCOP : 81623 (>75 %)  81624 (>75 %)  81625 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 30.0 +/- 21.9
Average RMSD (Å) : 0.480 +/- 0.164

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXXGVX
(φψ)-conformation: aappgba
Pattern: [DEQS][AFKT][AFL][akl][AGK]x[aek][G][V][efkl]
Conservation:0.190-0.691-0.320-0.579-0.291-0.645-0.4182.2801.253-0.778
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dih_*_161dih   -2332QAALALEGVQHHHHHSTTEEaaaaaxpvbb
1ei6_A_3031ei6   A308317DFLAGIAGVEHHHHTSTTEEaaaaaxpgxa
1n62_B_701n62   B7079SKAKALPGVFHHHHHSTTEEaaaaaxxvba
1pie_A_3251pie   A332341ETAQKQAGVLHHHHHSTTEEaaaaaxxvba
1q6h_A_941q6h   A108117EKFAKEKGVKHHHHHSTTEEaaaaaxpvxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dih_*_161dih   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 16
1dih_*_161dih   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 17
1dih_*_161dih   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 18
1q6h_A_941q6h   A     MSESELENOMETHIONINE K - 94
1q6h_A_941q6h   A     MSESELENOMETHIONINE D - 95
1q6h_A_941q6h   A     MSESELENOMETHIONINE A - 96
1q6h_A_941q6h   A     MSESELENOMETHIONINE A - 97

Clusters included in this Subclass
CLUSTER: HE.2.54
CLUSTER: HE.3.81