Information on SUBCLASS 7.2.1 |
Subclass Accession number: 2515
Subclass: 7.2.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.5 (>50 %) 2.5 (>75 %) 2.5.1 (>50 %) 2.5.1 (>75 %) 2.5.1.602.5.1.602.6 (>50 %) 2.6.1 (>50 %) GO : GO:0004659 (>75 %) GO:0004659 (>75 %) GO:0008318 (>75 %) GO:0008318 (>75 %) GO:0008483 (>50 %) GO:0016765 (>75 %) GO:0016765 (>75 %) GO:0016769 (>50 %) SCOP : 48207 (>75 %) 48207 (>75 %) 48239 (>75 %) 48239 (>75 %) 48246 (>75 %) 48246 (>75 %) 56751 (>50 %) 56752 (>50 %) 56753 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 12.8 +/- 18.4 Average RMSD (Å) : 0.767 +/- 0.208 Consensus geometry
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Consensus Sequence: | XhXhXXXXpXp |
(φψ)-conformation: | aalpppabpaa |
Pattern: | [HLV] | [ENR] | [EN] | [HL] | x | [DQ] | [AR] | [FL] | [HSY] | [ADV] | [AS] | [AE] | [EKR] | x | [ILY] | [GR] | [FIV] | [PT] | x | x | x | [DST] | x | [DE] | [DEK] | [FLV] |
Conservation: | -1.078 | 0.068 | 1.133 | 0.657 | -1.193 | 1.217 | 0.376 | 0.720 | 0.182 | -1.307 | 0.922 | 0.102 | 0.641 | -1.651 | -0.047 | 0.175 | 0.297 | 0.873 | -0.963 | -1.422 | -0.849 | -0.047 | -1.536 | 2.366 | 0.526 | -0.161 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1daa_A_44 | 1daa | A | 44 | 69 | VNEHIDRLYASAEKIRITIPYTKDKF | HHHHHHHHHHHHHHTT---SS-HHHH | aaaaaaaaaaaaaaalxxxabxaaaa |
1iye_A_53 | 1iye | A | 53 | 78 | HREHMQRLHDSAKIYRFPVSQSIDEL | HHHHHHHHHHHHHHHT----S-HHHH | aaaaaaaaaaaaaaavxwbaxxaaaa |
1mb8_A_242 | 1mb8 | A | 243 | 268 | LENLDQAFSVAERDLGVTRLLDPEDV | HHHHHHHHHHHHHHH-----S-HHHH | aaaaaaaaaaaaaaavxxxabxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1daa_A_44 | 1daa | A | PLPPYRIDOXAL-5'-PHOSPHATE | H - 47 |
1daa_A_44 | 1daa | A | PLPPYRIDOXAL-5'-PHOSPHATE | R - 50 |
1iye_A_53 | 1iye | A | PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID | H - 56 |
1iye_A_53 | 1iye | A | PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID | R - 59 |
Clusters included in this Subclass |
CLUSTER: HH.7.55 |