Information on SUBCLASS 8.2.1 |
Subclass Accession number: 2523
Subclass: 8.2.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1 (>75 %) 1.1.1 (>75 %) 1.1.1 (>75 %) GO : GO:0003700 (>75 %) GO:0003707 (>75 %) GO:0004872 (>75 %) GO:0004879 (>75 %) GO:0016614 (>75 %) GO:0016614 (>75 %) GO:0016616 (>75 %) GO:0016616 (>75 %) SCOP : 48507 (>75 %) 48508 (>75 %) 48509 (>75 %) 51734 (>75 %) 51734 (>75 %) 51735 (>75 %) 51735 (>75 %) 51751 (>75 %) 51751 (>75 %) |
Number of loops: 6 Average sequence ID (%) : 33.3 +/- 22.1 Average RMSD (Å) : 0.483 +/- 0.117 Consensus geometry
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Consensus Sequence: | KphPGFXpLpXX |
(φψ)-conformation: | aappgaaappaa |
Pattern: | [FLMVW] | x | x | [CFL] | [qsty] | [dekq] | [lm] | [alv] | [DSTV] | [EKNSY] | [cehs] | [ILV] | x | x | [ILMV] | [IKTV] | [EGQS] | [FWY] | [AT] | [EK] | [kmr] | [IL] | [P] | [G] | [FY] | x | [DEGNT] | [L] | [dst] | x | [aef] | [D] | [Q] | [iv] | [altv] | [L] | [FL] | [EKQ] | [ags] | [ACGS] | [acvw] | [HILMV] | [DE] | [AILV] | [FILM] | [FMVY] | [LMT] | [gr] |
Conservation: | -0.442 | -0.999 | -1.274 | -0.280 | -0.777 | -0.670 | -0.129 | -0.555 | -0.498 | -0.689 | -0.845 | 0.518 | -0.865 | -0.896 | 0.311 | -0.568 | -0.350 | 1.128 | 0.394 | 0.907 | -0.287 | 0.646 | 2.841 | 2.280 | 1.702 | -1.186 | -0.526 | 1.158 | -0.789 | -1.255 | -0.905 | 2.280 | 1.719 | -0.198 | -0.865 | 1.158 | 0.409 | 0.472 | -0.612 | -0.427 | -0.945 | -0.511 | 1.157 | -0.065 | -0.011 | -0.189 | -0.013 | -0.458 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fcy_A_224 | 1fcy | A | 227 | 274 | WDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLR | HHHHHHHHHHHHHHHHHHHHTSTTGGGS-HHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaxpvaaaxpaaaaaaaaaaaaaaaaaaa |
1ie9_A_227 | 1ie9 | A | 227 | 274 | LPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLR | HHHHHHHHHHHHHHHHHHHHTSTTGGGS-HHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaxpgaaaxxaaaaaaaaaaaaaaaaaaa |
1osh_A_287 | 1osh | A | 288 | 335 | FLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLR | HHHHHHHHHHHHHHHHHHHHTSTTGGGS-HHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaxpvaaaxpaaaaaaaaaaaaaaaaaaa |
1pdu_A_352 | 1pdu | A | 356 | 403 | VQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLR | HHHHHHHHHHHHHHHHHHHTTSTTGGGS-HHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaxpvaaaxxaaaaaaaaaaaaaaaaaaa |
1qkm_A_293 | 1qkm | A | 295 | 342 | MMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMG | HHHHHHHHHHHHHHHHHHHHHSTTGGGS-HHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaxpgaaaxxaaaaaaaaaaaaaaaaaaa |
2prg_A_277 | 2prg | A | 282 | 329 | FQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTM | HHHHHHHHHHHHHHHHHHHHHSTTGGGS-HHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaxpgaaaxpaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.9.3 |