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Information on SUBCLASS 0.1.13
Subclass Accession number: 2563
Subclass: 0.1.13 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 9.5 +/- 12.9
Average RMSD (Å) : 0.542 +/- 0.173

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: XchX
(φψ)-conformation: bbaa
Pattern: x[dkny][acfilmtv]xx[acfivw][acfimvy]x
Conservation:-0.1552.0680.352-1.1200.358-0.292-0.173-1.038
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6y_A_11181e6y   A11211128VGLDMAHEEESHHHHHbxaaaaaa
1g2q_A_271g2q   A2835EDFLPIFREE-HHHHHbxaaaaaa
1iat_A_1151iat   A115122KDVMPEVNEESHHHHHbxaaaaaa
1jih_A_1561jih   A159166LDLGRICFEE-HHHHHbbaaaaaa
1m5s_A_1131m5s   A114121QDNVGFKLEE-HHHHHbxaaaaaa
1m5w_A_51m5w   A815VNIDHIATEE-HHHHHbxaaaaaa
1mkf_A_2571mkf   A259266MNTCPCYYEESTHHHHbbaaaaaa
1o98_A_3941o98   A398405NYANPDMVEE-HHHHHbbaaaaaa
1pv9_A_1101pv9   A112119KKIDDVIKEE-HHHHHbxaaaaaa
1scz_A_2001scz   A207214VNMKPIMDEE-HHHHHbxaaaaaa
1usu_B_141usu   B1421KNCIGWAKEETHHHHHbxaaaaaa
1zrn_*_161zrn   -1623FDVHSVVGEETHHHHHbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m5w_A_51m5w   A     DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE N - 9
1m5w_A_51m5w   A     PO4PHOSPHATE ION N - 9
1m5w_A_51m5w   A     DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE D - 11
1m5w_A_51m5w   A     DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE H - 12
1m5w_A_51m5w   A     PO4PHOSPHATE ION H - 12
1o98_A_3941o98   A     MNMANGANESE (II) ION N - 398
1o98_A_3941o98   A     MNMANGANESE (II) ION D - 403
1o98_A_3941o98   A     2PG2-PHOSPHOGLYCERIC ACID D - 403
1o98_A_3941o98   A     MNMANGANESE (II) ION M - 404
1o98_A_3941o98   A     2PG2-PHOSPHOGLYCERIC ACID M - 404
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o98_A_3941o98   A AC1MN BINDING SITE FOR CHAIN AD - 403

Clusters included in this Subclass
CLUSTER: EH.0.31
CLUSTER: EH.2.76