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Information on SUBCLASS 0.1.35
Subclass Accession number: 2585
Subclass: 0.1.35 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 5.6 +/- 11.4
Average RMSD (Å) : 0.317 +/- 0.098

Consensus geometry
d (Å): 3 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXXX
(φψ)-conformation: bbaa
Pattern: [lmt][egqst]x[dnrwy]x[almv]
Conservation:1.472-0.315-1.056-0.727-0.3560.982
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aco_*_681aco   -7176MQDATAEEHHHHbbaaaa
1gpu_A_4361gpu   A441446TFLNFVEEHHHHbxaaaa
1hx6_A_1081hx6   A112117TSGWHLEEHHHHbxaaaa
1k55_A_1061k55   A106111LTLRGAEEHHHHbxaaaa
1o98_A_1781o98   A183188SGRYYSEEHHHHbxaaaa
1pz4_A_621pz4   A6671MEDDIMEEHHHHbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aco_*_681aco   *     FS4IRON/SULFUR CLUSTER Q - 72
1aco_*_681aco   *     TRAACONITATE ION Q - 72
1aco_*_681aco   *     TRAACONITATE ION A - 74
1aco_*_681aco   *     TRAACONITATE ION T - 75
1gpu_A_4361gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE T - 441
1gpu_A_4361gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE F - 442
1gpu_A_4361gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE F - 445
1hx6_A_1081hx6   A     MPD2-METHYL-2,4-PENTANEDIOL R - 108
1hx6_A_1081hx6   A     MPD2-METHYL-2,4-PENTANEDIOL H - 109
1hx6_A_1081hx6   A     MPD2-METHYL-2,4-PENTANEDIOL T - 110
1hx6_A_1081hx6   A     MPD2-METHYL-2,4-PENTANEDIOL E - 111
1k55_A_1061k55   A     KCXLYSINE NZ-CARBOXYLIC ACID A - 111
1k55_A_1061k55   A     KCXLYSINE NZ-CARBOXYLIC ACID I - 112
1k55_A_1061k55   A     SULSULFATE ANION I - 112
1k55_A_1061k55   A     SULSULFATE ANION Q - 113
1o98_A_1781o98   A     2PG2-PHOSPHOGLYCERIC ACID R - 185
1pz4_A_621pz4   A     PLMPALMITIC ACID L - 64
1pz4_A_621pz4   A     PLMPALMITIC ACID M - 71
1pz4_A_621pz4   A     PLMPALMITIC ACID I - 74
1pz4_A_621pz4   A     PLMPALMITIC ACID G - 75
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o98_A_1781o98   A AC32PG BINDING SITE FOR CHAIN AR - 185

Clusters included in this Subclass
CLUSTER: EH.0.40