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Information on SUBCLASS 1.1.25
Subclass Accession number: 2654
Subclass: 1.1.25 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 8.2 +/- 13.7
Average RMSD (Å) : 0.500 +/- 0.217

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XhXXX
(φψ)-conformation: bbpaa
Pattern: x[FHILVY][acdnst]xx[adeknrs]x
Conservation:-0.4392.0040.109-1.0400.343-0.260-0.717
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu6_O_461bu6   O4652EHDPMEIEE-HHHHbbbaaaa
1f0c_A_2901f0c   A296302SYNLVDAEE-HHHHbbbaaaa
1g6g_A_1411g6g   A146152FINDKFKEE-HHHHbxxaaaa
1ga8_A_1521ga8   A158164LINLKKWEE-HHHHxbxaaaa
1ii2_A_681ii2   A6874KLSEESFEE-HHHHxbxaaaa
1jti_A_271jti   A2834FYCPIAIEE-HHHHbbbaaaa
1k7w_A_3561k7w   A356362QISKENMEE-HHHHbxbaaaa
1l1l_A_4211l1l   A423429EVFPLIAEE-HHHHbbbaaaa
1m1h_A_1711m1h   A171177PLKEEEVEE-HHHHxbxaaaa
1mdb_A_4391mdb   A439445KVAAEEVEE-HHHHxbxaaaa
1ofw_A_1931ofw   A194200NFTHRRHEE-HHHHxxxaaaa
1ub4_A_791ub4   A8086SIAWRAREE-HHHHxbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ga8_A_1521ga8   A     MSESELENOMETHIONINE F - 152
1ga8_A_1521ga8   A     MSESELENOMETHIONINE N - 153
1ga8_A_1521ga8   A     DEL4-DEOXYLACTOSE N - 153
1ga8_A_1521ga8   A     MNMANGANESE (II) ION N - 153
1ga8_A_1521ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE N - 153
1ga8_A_1521ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE A - 154
1ga8_A_1521ga8   A     MNMANGANESE (II) ION G - 155
1ga8_A_1521ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE G - 155
1ga8_A_1521ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE V - 156
1ofw_A_1931ofw   A     HECHEME C S - 193
1ofw_A_1931ofw   A     HECHEME C N - 194
1ofw_A_1931ofw   A     HECHEME C F - 195
1ofw_A_1931ofw   A     HECHEME C T - 196
1ofw_A_1931ofw   A     HECHEME C H - 197
1ofw_A_1931ofw   A     HECHEME C R - 199
1ofw_A_1931ofw   A     HECHEME C H - 200
1ofw_A_1931ofw   A     HECHEME C L - 201
1ofw_A_1931ofw   A     HECHEME C S - 203
1ofw_A_1931ofw   A     HECHEME C L - 204
1ofw_A_1931ofw   A     HECHEME C M - 205
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ofw_A_1931ofw   A AC8HEC BINDING SITE FOR CHAIN AS - 193
1ofw_A_1931ofw   A AC6HEC BINDING SITE FOR CHAIN AF - 195
1ofw_A_1931ofw   A AC8HEC BINDING SITE FOR CHAIN AT - 196
1ofw_A_1931ofw   A AC6HEC BINDING SITE FOR CHAIN AH - 197
1ofw_A_1931ofw   A AC8HEC BINDING SITE FOR CHAIN AR - 199
1ofw_A_1931ofw   A AC8HEC BINDING SITE FOR CHAIN AH - 200
1ofw_A_1931ofw   A AC6HEC BINDING SITE FOR CHAIN AL - 201

Clusters included in this Subclass
CLUSTER: EH.0.19