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Information on SUBCLASS 4.1.3
Subclass Accession number: 268
Subclass: 4.1.3 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 12.9 +/- 14.1
Average RMSD (Å) : 0.700 +/- 0.240

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: phXXphXh
(φψ)-conformation: aabaapbb
Pattern: x[dekpqr]x[AILV]x[AEKRST][AFIKLMV]x[aps][DHKNRS][aklmv]x[FLPV]x
Conservation:-0.8100.059-0.7171.673-0.3380.417-0.203-1.4331.2091.558-0.118-1.3060.726-0.716
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dlj_A_951dlj   A101114IKEVLSVNSHATLIHHHHHHH-SS-EEEaaaaaaabaaxxxb
1iib_A_641iib   A6477LPEIQRLLPNKPVEHHHHHHH-TTS-EEaaaaaaabaabwbb
1jih_A_771jih   A7790IQEALKKCSNLIPIHHHHHHH-TT-EEEaaaaaaabaaxbwb
1jms_A_3051jms   A316329KEAVVTFLPDALVTHHHHHHH-TT-EEEaaaaaaabaaxbbb
1jz7_A_4661jz7   A472485YRWIKSVDPSRPVQHHHHHHH-TTS-EEaaaaaaabaabxbb
1nij_A_1671nij   A170183HERLARINARAPVYHHHHHHH-SSS-EEaaaaaaabaaxxbb
1nul_A_971nul   A97110AVAIREMYPKAHFVHHHHHHH-TTSEEEaaaaaaabaaxxxb
1o5z_A_3721o5z   A376388VDMAKKFFKNVEV.HHHHHHH-S--EE.aaaaaaabaapbb.
1pq4_A_1131pq4   A113126LEKLKAANANMKLIHHHHHHH-SSSEEEaaaaaaabaaxxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dlj_A_951dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE H - 96
1dlj_A_951dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE T - 99
1dlj_A_951dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE V - 100
1dlj_A_951dlj   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE E - 103
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE A - 466
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE P - 480
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE S - 481
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE R - 482

Clusters included in this Subclass
CLUSTER: HE.4.48