Information on SUBCLASS 4.1.5 |
Subclass Accession number: 270
Subclass: 4.1.5 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) 1 (>50 %) GO : GO:0004497 (>50 %) SCOP : 48263 (>50 %) 48264 (>50 %) 48265 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 25.0 +/- 20.8 Average RMSD (Å) : 0.967 +/- 0.379 Consensus geometry
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Consensus Sequence: | XpXXXhph |
(φψ)-conformation: | aabaapbb |
Pattern: | x | [AQT] | [IL] | [F] | [GR] | [DR] | [FR] | [PT] | [ADE] | [ILM] | [KQS] | [CL] |
Conservation: | -1.171 | -0.847 | 0.588 | 2.717 | -0.266 | -0.317 | -0.492 | 0.474 | -0.604 | 0.206 | -0.361 | 0.072 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eup_A_354 | 1eup | A | 366 | 377 | RALFGRFPALSL | HHHHHH-TT-EE | aaaaaabaapbx |
1q5d_A_368 | 1q5d | A | 380 | 391 | GTIFRRFPEMKL | HHHHHH-TT-EE | aaaaaabaapbx |
1r6t_A_294 | 1r6t | A | 294 | 305 | PQIFRDRTDIQC | HHHHTT----EE | aaaaeaxaaxpb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eup_A_354 | 1eup | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 354 |
1eup_A_354 | 1eup | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 356 |
1eup_A_354 | 1eup | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 357 |
1eup_A_354 | 1eup | A | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 360 |
1q5d_A_368 | 1q5d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 368 |
1q5d_A_368 | 1q5d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 370 |
1q5d_A_368 | 1q5d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 371 |
1q5d_A_368 | 1q5d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 374 |
1r6t_A_294 | 1r6t | A | MSESELENOMETHIONINE | Q - 295 |
1r6t_A_294 | 1r6t | A | MSESELENOMETHIONINE | L - 306 |
1r6t_A_294 | 1r6t | A | TYMTRYPTOPHANYL-5'AMP | I - 307 |
1r6t_A_294 | 1r6t | A | TYMTRYPTOPHANYL-5'AMP | P - 308 |
1r6t_A_294 | 1r6t | A | TYMTRYPTOPHANYL-5'AMP | C - 309 |
1r6t_A_294 | 1r6t | A | TYMTRYPTOPHANYL-5'AMP | A - 310 |
Clusters included in this Subclass |
CLUSTER: HE.5.180 |