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Information on SUBCLASS 4.1.5
Subclass Accession number: 270
Subclass: 4.1.5 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>50 %)  
GO : GO:0004497 (>50 %)  
SCOP : 48263 (>50 %)  48264 (>50 %)  48265 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 25.0 +/- 20.8
Average RMSD (Å) : 0.967 +/- 0.379

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XpXXXhph
(φψ)-conformation: aabaapbb
Pattern: x[AQT][IL][F][GR][DR][FR][PT][ADE][ILM][KQS][CL]
Conservation:-1.171-0.8470.5882.717-0.266-0.317-0.4920.474-0.6040.206-0.3610.072
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eup_A_3541eup   A366377RALFGRFPALSLHHHHHH-TT-EEaaaaaabaapbx
1q5d_A_3681q5d   A380391GTIFRRFPEMKLHHHHHH-TT-EEaaaaaabaapbx
1r6t_A_2941r6t   A294305PQIFRDRTDIQCHHHHTT----EEaaaaeaxaaxpb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eup_A_3541eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 354
1eup_A_3541eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 356
1eup_A_3541eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 357
1eup_A_3541eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 360
1q5d_A_3681q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 368
1q5d_A_3681q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 370
1q5d_A_3681q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 371
1q5d_A_3681q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 374
1r6t_A_2941r6t   A     MSESELENOMETHIONINE Q - 295
1r6t_A_2941r6t   A     MSESELENOMETHIONINE L - 306
1r6t_A_2941r6t   A     TYMTRYPTOPHANYL-5'AMP I - 307
1r6t_A_2941r6t   A     TYMTRYPTOPHANYL-5'AMP P - 308
1r6t_A_2941r6t   A     TYMTRYPTOPHANYL-5'AMP C - 309
1r6t_A_2941r6t   A     TYMTRYPTOPHANYL-5'AMP A - 310

Clusters included in this Subclass
CLUSTER: HE.5.180