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Information on SUBCLASS 1.3.5
Subclass Accession number: 2718
Subclass: 1.3.5 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 20.3 +/- 19.7
Average RMSD (Å) : 0.506 +/- 0.192

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpXpX
(φψ)-conformation: bbeaa
Pattern: [FILVY][GIKLMTV][ACGST][ehrstwy][GS][cdkrsty][aegpqst][cgilmvy]xx[ACITV]x[adekqrst][AGLVY][AILVY][adens]
Conservation:1.1530.0420.637-0.6122.770-0.499-0.721-0.574-1.303-0.8950.581-0.917-0.2300.1000.600-0.133
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1brt_*_921brt   -94109LVGFSTGTGEVARYVSEEEEGGGHHHHHHHHHxbbbeaaaaaaaaaaa
1g0u_J_1241g0u   J124139YGAHGYSGFYTFSLLDEEE-TTHHHHHHHHHHbbbbeaaaaaaaaaaa
1ik6_A_2091ik6   A211226LVTYGAVVHKALEAAEEEE-TTHHHHHHHHHHbxbbeaaaaaaaaaaa
1itz_A_5651itz   A567582VMGTGSELEIAAKAADEEE-GGGHHHHHHHHHbbbbeaaaaaaaaaaa
1ivy_A_1441ivy   A146161LTGESYAGIYIPTLAVEEEETTHHHHHHHHHHbbbbeaaaaaaaaaaa
1kek_A_2711kek   A273288IVSMGSSCETIEEVINEEE-STHHHHHHHHHHxbbbeaaaaaaaaaaa
1l8a_A_7241l8a   A728743LLGSGSILRHVREAAEEEE-GGGHHHHHHHHHbbbbeaaaaaaaaaaa
1moq_*_4661moq   -469484FLGRGDQYPIALEGALEEE-GGGHHHHHHHHHbbbbeaaaaaaaaaaa
1nfj_A_301nfj   A3348IKARGRAISRAVDVAEEEEETTHHHHHHHHHHxbbbeaaaaaaaaaaa
1nh9_A_281nh9   A3146IKARGKAINKAVDVAEEEEEGGGHHHHHHHHHbbbbeaaaaaaaaaaa
1ni4_B_2071ni4   B209224VVSHSRPVGHCLEAAAEEE-STHHHHHHHHHHbbbbeaaaaaaaaaaa
1ols_B_2221ols   B224239LVAWGTQVHVIREVASEEE-TTHHHHHHHHHHbbbbeaaaaaaaaaaa
1qgd_A_5521qgd   A554569FIATGSEVELAVAAYEEEE-GGGHHHHHHHHHxbbbeaaaaaaaaaaa
1qj4_A_741qj4   A7691LVGESCGGLNIAIAADEEEETTHHHHHHHHHHxbbxeaaaaaaaaaaa
1qs0_B_2241qs0   B225240VLTYGTTVYVAQVAAEEEE-TTHHHHHHHHHHbxbbeaaaaaaaaaaa
1udv_A_331udv   A3651LKGTGREISKAVDVYNEEEETTHHHHHHHHHHxbbbeaaaaaaaaaaa
1umd_B_2051umd   B207222LICYGTVMPEVLQAAAEEE-GGGHHHHHHHHHbxbbeaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1moq_*_4661moq   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID R - 472
1moq_*_4661moq   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID D - 474
1moq_*_4661moq   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID Q - 475
1moq_*_4661moq   *     MPD2-METHYL-2,4-PENTANEDIOL Y - 476
1moq_*_4661moq   *     MPD2-METHYL-2,4-PENTANEDIOL L - 480
1moq_*_4661moq   *     GLPGLUCOSAMINE 6-PHOSPHATE L - 484
1moq_*_4661moq   *     GLPGLUCOSAMINE 6-PHOSPHATE K - 485
1moq_*_4661moq   *     GLPGLUCOSAMINE 6-PHOSPHATE E - 488
1ni4_B_2071ni4   B     MSESELENOMETHIONINE T - 208
1ni4_B_2071ni4   B     MSESELENOMETHIONINE V - 210
1ni4_B_2071ni4   B     MSESELENOMETHIONINE S - 211
1ni4_B_2071ni4   B     MSESELENOMETHIONINE H - 212
1ni4_B_2071ni4   B     MSESELENOMETHIONINE S - 213
1ni4_B_2071ni4   B     MSESELENOMETHIONINE R - 214
1ni4_B_2071ni4   B     MSESELENOMETHIONINE V - 216
1qj4_A_741qj4   A     GOLGLYCEROL E - 79
1qj4_A_741qj4   A     GOLGLYCEROL S - 80
1qj4_A_741qj4   A     GOLGLYCEROL C - 81
1qj4_A_741qj4   A     GOLGLYCEROL G - 82
1qs0_B_2241qs0   B     MSESELENOMETHIONINE Y - 228
1qs0_B_2241qs0   B     MSESELENOMETHIONINE G - 229
1qs0_B_2241qs0   B     MSESELENOMETHIONINE T - 230
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1brt_*_921brt   * NULCATALYTIC TRIAD.S - 98
1ivy_A_1441ivy   A CATCATALYTIC TRIAD SERINE CARBOXYPEPTIDASE.S - 150
1qj4_A_741qj4   A CATCATALYTIC TRIADS - 80

Clusters included in this Subclass
CLUSTER: EH.2.51
CLUSTER: EH.3.279
CLUSTER: EH.3.42
CLUSTER: EH.4.28