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Information on SUBCLASS 2.1.6
Subclass Accession number: 2755
Subclass: 2.1.6 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 46

Average sequence ID (%) : 11.0 +/- 14.5
Average RMSD (Å) : 0.583 +/- 0.213

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: [fhilmvy]xxx[DEGKNRST]xxx[acfiklmtv]
Conservation:0.636-0.573-0.7760.0352.315-1.092-0.254-0.087-0.203
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7g_E_3381a7g   E342350LTYISTSQREE-S-HHHHbbbabaaaa
1bg6_*_1831bg6   -184192VAVENVLHTEE-S-HHHHbxbabaaaa
1bjt_*_5731bjt   -576584IAFYNMPDYEESSHHHHHxbbabaaaa
1bt4_A_2991bt4   A302310FRLASEELEEE-SSHHHHbbbabaaaa
1bu8_A_2831bu8   A283291YPCSSYEKFEE-S-HHHHbpbabaaaa
1ce2_A_341ce2   A3745VRRASVLECEE-SSHHHHbxbabaaaa
1d5a_A_1811d5a   A182190ESVSTEKEMEE-SSHHHHbxbabaaaa
1dbh_A_5241dbh   A526534FSAKSAEEKEE-SSHHHHbbbabaaaa
1enf_A_521enf   A5563VKFATADLAEE-SSHHHHbbbabaaaa
1f14_A_401f14   A4351LVDQTEDILEE-S-HHHHxbbabaaaa
1f1u_A_2111f1u   A217225FATHEKHNIEE-SSHHHHbxbabaaaa
1f1x_A_2111f1x   A217225FSTHEKHNIEE-SSHHHHbbbabaaaa
1f9f_A_3301f9f   A335343VTYHSETQREE-SSHHHHbbbabaaaa
1gpl_*_2831gpl   -283291YPCASYDEFEE-S-HHHHbpbabaaaa
1h45_A_341h45   A3745IKRDSPIQCEE-SSHHHHbbbabaaaa
1h76_A_351h76   A3947VKKSSYLDCEE-SSHHHHbxbabaaaa
1hbn_B_2911hbn   B294302YGTDDLAMWEE-S-HHHHxbbabaaaa
1hpl_A_2831hpl   A283291FSCASYSDFEE-S-HHHHbxbabaaaa
1hwl_A_5931hwl   A594602VRLPRACDSEE-SSHHHHbbbabaaaa
1i1q_A_2671i1q   A272280LPCPSPLAAEE-S-HHHHbwbabaaaa
1i4g_A_661i4g   A6977VDFDSKDIVEE-S-HHHHbxbabaaaa
1iej_A_321iej   A3745VQKATYLDCEE-SSHHHHbbbabaaaa
1jc4_A_121jc4   A1523YACPDADEAEE-S-HHHHbxbabaaaa
1k8k_D_1611k8k   D167175TVFKDDDDVEE-SSHHHHbbbaxaaaa
1kjw_A_5811kjw   A581589HFVSSREKMEE-S-HHHHxxxaxaaaa
1kll_A_741kll   A7785FEFPDTASVEE-SSHHHHbxbabaaaa
1kw3_B_581kw3   B6472LEVDDAAALEE-SSHHHHbxbabaaaa
1lvg_A_1181lvg   A122130VQPPSLDVLEE-S-HHHHxbxabaaaa
1mlw_A_3721mlw   A374382FVSESFEDAEE-S-HHHHbxxabaaaa
1mx3_A_2181mx3   A218226QRVSTLQDLEE-SSHHHHxbbabaaaa
1nnf_A_1681nnf   A170178KLYAKNSVAEE-SSHHHHbxbabaaaa
1nqu_A_1111nqu   A116124ITADTLEQAEEESSHHHHxbbabaaaa
1o5z_A_3871o5z   A387395EVIEDPLEAEE-SSHHHHbbbaxaaaa
1o7t_A_1701o7t   A170178KPYAKNSVAEE-SSHHHHbxbabaaaa
1pzx_A_1571pzx   A161169FTVDNLDYLEE-S-HHHHbbbabaaaa
1qgd_A_5781qgd   A581589VSMPSTDAFEE-S-HHHHbxbabaaaa
1qtm_A_3311qtm   A333341HRAPEPYKAEE-SSHHHHbbxabaaaa
1reg_X_21reg   X412ITLKKPEDFEE-SSTTHHbbbabaaaa
1ro2_A_1071ro2   A110118MDFESKEKLEEES-HHHHxbxabaaaa
1s0u_A_1071s0u   A115123VDSPGHETLEE-SSHHHHbbbabaaaa
1s5d_A_591s5d   A6169STSISLRSAEEBSSHHHHxbbabaaaa
1s7j_A_1461s7j   A148156FVLKDEETVEE-S-HHHHbbbabaaaa
1uc2_A_4341uc2   A435443VRAASMRVVEEES-HHHHbbbabaaaa
2dap_*_2582dap   -265273LKLDRNPDFEEESBHHHHbbbabaaaa
2nac_A_2362nac   A236244TWHATREDMEE-SSHHHHbxbabaaaa
2ncd_A_3772ncd   A380388LQSIDAQAKEE-S-HHHHbbpaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbh_A_5241dbh   A     MSESELENOMETHIONINE F - 526
1dbh_A_5241dbh   A     MSESELENOMETHIONINE E - 533
1dbh_A_5241dbh   A     MSESELENOMETHIONINE K - 534
1dbh_A_5241dbh   A     MSESELENOMETHIONINE N - 535
1dbh_A_5241dbh   A     MSESELENOMETHIONINE N - 536
1f1u_A_2111f1u   A     MW2MANGANESE DIHYDRATE ION H - 214
1f1u_A_2111f1u   A     MW2MANGANESE DIHYDRATE ION A - 216
1f1x_A_2111f1x   A     FELHYDRATED FE H - 213
1f1x_A_2111f1x   A     FELHYDRATED FE H - 214
1f1x_A_2111f1x   A     FELHYDRATED FE A - 216
1jc4_A_121jc4   A     MSESELENOMETHIONINE H - 12
1jc4_A_121jc4   A     MSESELENOMETHIONINE V - 13
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 14
1jc4_A_121jc4   A     MSESELENOMETHIONINE Y - 15
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 16
1jc4_A_121jc4   A     MSESELENOMETHIONINE C - 17
1jc4_A_121jc4   A     MSESELENOMETHIONINE P - 18
1jc4_A_121jc4   A     MSESELENOMETHIONINE D - 19
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 20
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 23
1jc4_A_121jc4   A     MSESELENOMETHIONINE S - 24
1jc4_A_121jc4   A     MSESELENOMETHIONINE K - 25
1jc4_A_121jc4   A     MSESELENOMETHIONINE Y - 27
1jc4_A_121jc4   A     MSESELENOMETHIONINE Q - 28
1jc4_A_121jc4   A     MSESELENOMETHIONINE F - 31
1kll_A_741kll   A     MSESELENOMETHIONINE I - 75
1kll_A_741kll   A     MSESELENOMETHIONINE F - 77
1kll_A_741kll   A     MSESELENOMETHIONINE F - 79
1kll_A_741kll   A     MSESELENOMETHIONINE K - 88
1kll_A_741kll   A     MSESELENOMETHIONINE L - 92
1lvg_A_1181lvg   A     ADPADENOSINE-5'-DIPHOSPHATE V - 122
1lvg_A_1181lvg   A     ADPADENOSINE-5'-DIPHOSPHATE R - 133
1lvg_A_1181lvg   A     ADPADENOSINE-5'-DIPHOSPHATE L - 134
1lvg_A_1181lvg   A     ADPADENOSINE-5'-DIPHOSPHATE L - 136
1lvg_A_1181lvg   A     ADPADENOSINE-5'-DIPHOSPHATE R - 137
1lvg_A_1181lvg   A     5GPGUANOSINE-5'-MONOPHOSPHATE R - 137
1nnf_A_1681nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID K - 174
1nnf_A_1681nnf   A     FEFE (III) ION N - 175
1nnf_A_1681nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID N - 175
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE I - 111
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE T - 112
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE F - 113
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE G - 114
1nqu_A_1111nqu   A     PO4PHOSPHATE ION T - 117
1o7t_A_1701o7t   A     HF5HF OXO CLUSTER HF5 K - 174
1o7t_A_1701o7t   A     HF5HF OXO CLUSTER HF5 N - 175
1o7t_A_1701o7t   A     HF5HF OXO CLUSTER HF5 S - 176
1pzx_A_1571pzx   A     PLMPALMITIC ACID H - 159
1pzx_A_1571pzx   A     PLMPALMITIC ACID F - 161
1pzx_A_1571pzx   A     PLMPALMITIC ACID L - 169
1ro2_A_1071ro2   A     MNMANGANESE (II) ION D - 111
2dap_*_2582dap   *     API2,6-DIAMINOPIMELIC ACID N - 270
2dap_*_2582dap   *     API2,6-DIAMINOPIMELIC ACID T - 274
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7t_A_1701o7t   A HF1HF5 BINDING SITE FOR CHAIN AN - 175

Clusters included in this Subclass
CLUSTER: EH.2.188
CLUSTER: EH.2.49
CLUSTER: EH.2.54
CLUSTER: EH.3.16
CLUSTER: EH.3.79
CLUSTER: EH.4.13
CLUSTER: EH.4.259