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Information on SUBCLASS 2.1.16
Subclass Accession number: 2765
Subclass: 2.1.16 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 8.8 +/- 14.4
Average RMSD (Å) : 0.677 +/- 0.196

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: x[aflmvy][afgkltv]x[dgknqrt][degknrst]xxxx
Conservation:-0.3162.103-0.6630.8000.6260.156-1.191-0.802-0.9330.219
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c4q_A_1271c4q   A128137ELATNRANLQEEEE--TTHHxbbbaxaaaa
1cfr_*_2651cfr   -266275IFKINSVLDVEEE-SSHHHHbbxbabaaaa
1e6y_A_11761e6y   A11781187KVFTGDDALAEEEES-HHHHbbbbaxaaaa
1f07_A_1481f07   A149158YMGAQGPMMLEEE--SHHHHbbxbabaaaa
1f0k_A_81f0k   A1120VMAGGTGGHVEE--SSHHHHbbbxabaaaa
1h2e_A_511h2e   A5261IYTSTSGRALEEE-SSHHHHbbbxaxaaaa
1id1_A_761id1   A7887LALSDNDADNEE-SS-HHHHbxaxabaaaa
1ihu_A_4911ihu   A495504LVTLPETTPVEEE-SSHHHHxxbbabaaaa
1odo_A_581odo   A5865..VSKDARAH..EES-HHHH..bbaxaaaa
1qhf_A_511qhf   A5261LYTSKLSRAIEEE-SSHHHHbbbxabaaaa
1uzb_A_4461uzb   A448457GVYSRKREHLEEE-S-HHHHbbbbaxaaaa
1v4v_A_71v4v   A918VLAFGTRPEAEEEE-SHHHHxbbbabaaaa
2bos_A_1272bos   A128137EYWTNRWNLQEEEE--TTHHxbbbaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c4q_A_1271c4q   A     GALD-GALACTOSE A - 130
1c4q_A_1271c4q   A     GALD-GALACTOSE T - 131
1c4q_A_1271c4q   A     GALD-GALACTOSE N - 132
1c4q_A_1271c4q   A     GALD-GALACTOSE R - 133
1f07_A_1481f07   A     MPD2-METHYL-2,4-PENTANEDIOL A - 152
1f07_A_1481f07   A     MPD2-METHYL-2,4-PENTANEDIOL Q - 153
1f07_A_1481f07   A     MPD2-METHYL-2,4-PENTANEDIOL G - 154
1f07_A_1481f07   A     MPD2-METHYL-2,4-PENTANEDIOL P - 155
1f07_A_1481f07   A     MPD2-METHYL-2,4-PENTANEDIOL L - 158
1h2e_A_511h2e   A     PO4PHOSPHATE ION R - 59
1h2e_A_511h2e   A     EDO1,2-ETHANEDIOL R - 59
1ihu_A_4911ihu   A     ADPADENOSINE-5'-DIPHOSPHATE V - 496
1ihu_A_4911ihu   A     TASTRIHYDROXYARSENITE(III) P - 499
1ihu_A_4911ihu   A     ADPADENOSINE-5'-DIPHOSPHATE E - 500
1ihu_A_4911ihu   A     TASTRIHYDROXYARSENITE(III) E - 500
1ihu_A_4911ihu   A     ADPADENOSINE-5'-DIPHOSPHATE T - 501
1ihu_A_4911ihu   A     MGMAGNESIUM ION T - 502
1ihu_A_4911ihu   A     ADPADENOSINE-5'-DIPHOSPHATE T - 502
1ihu_A_4911ihu   A     ADPADENOSINE-5'-DIPHOSPHATE P - 503
1odo_A_581odo   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 60
1qhf_A_511qhf   A     3PG3-PHOSPHOGLYCERIC ACID R - 59
1v4v_A_71v4v   A     MSESELENOMETHIONINE R - 7
1v4v_A_71v4v   A     MSESELENOMETHIONINE V - 9
1v4v_A_71v4v   A     MSESELENOMETHIONINE L - 10
1v4v_A_71v4v   A     MSESELENOMETHIONINE A - 11
1v4v_A_71v4v   A     MSESELENOMETHIONINE F - 12
1v4v_A_71v4v   A     MSESELENOMETHIONINE P - 16
1v4v_A_71v4v   A     MSESELENOMETHIONINE E - 17
1v4v_A_71v4v   A     MSESELENOMETHIONINE A - 18
1v4v_A_71v4v   A     MSESELENOMETHIONINE T - 19
2bos_A_1272bos   A     GALD-GALACTOSE E - 128
2bos_A_1272bos   A     GALD-GALACTOSE Y - 129
2bos_A_1272bos   A     GALD-GALACTOSE W - 130
2bos_A_1272bos   A     GLCGLUCOSE W - 130
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h2e_A_511h2e   A PO4PO4 BINDING SITE FOR CHAIN AR - 59

Clusters included in this Subclass
CLUSTER: EH.3.57