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Information on SUBCLASS 2.1.25
Subclass Accession number: 2774
Subclass: 2.1.25 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 6.1 +/- 7.6
Average RMSD (Å) : 0.940 +/- 0.152

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XhXphp
(φψ)-conformation: bbabaa
Pattern: [AFLV]x[aly]x[DHST][alvy][ADEKN][EGNQT]x[aegr]xxxx[aelm]xx[aks]
Conservation:0.9210.487-0.571-0.5421.056-0.8330.6850.355-0.136-0.701-0.8991.580-1.5582.004-1.030-0.110-1.1620.455
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i7q_A_671i7q   A7087VQALTANGPALLPLLDEAEEE-SSTGGGHHHHHHHHbbxabaaaaaaaaaaaaa
1ijb_A_6751ijb   A675692FVLSSVDELEQQRDEIVSEEESSGGGHHHHHHHHHHbbbabaaaaaaaaaaaaa
1jtv_A_301jtv   A3451ATLRDLKTQGRLWEAARAEEES-GGGTHHHHHHHHHxbbabaaaaaaaaaaaaa
1pjr_*_3541pjr   -356373VLYRTNAQSRVMEEMLLKEEESSGGGHHHHHHHHHHbbbabaaaaaaaaaaaaa
1v7z_A_1131v7z   A116133LMNGHYENSMFIVEGIDLEEE-SGGGHHHHHHHHHHxbxabaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1v7z_A_1131v7z   A     MNMANGANESE (II) ION G - 119
1v7z_A_1131v7z   A     ZNZINC ION G - 119
1v7z_A_1131v7z   A     CRNN-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE G - 119
1v7z_A_1131v7z   A     MNMANGANESE (II) ION H - 120
1v7z_A_1131v7z   A     ZNZINC ION H - 120
1v7z_A_1131v7z   A     CRNN-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE H - 120
1v7z_A_1131v7z   A     MNMANGANESE (II) ION Y - 121
1v7z_A_1131v7z   A     CRNN-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE Y - 121
1v7z_A_1131v7z   A     MNMANGANESE (II) ION E - 122
1v7z_A_1131v7z   A     CRNN-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE E - 122

Clusters included in this Subclass
CLUSTER: EH.5.192
CLUSTER: EH.6.69