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PDB code:

Information on SUBCLASS 2.2.5

Subclass Accession number: 2800 Subclass: 2.2.5 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 9 Average sequence ID (%) : 7.3 +/- 11.9 Average RMSD (Å) : 0.767 +/- 0.274 Consensus geometry d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c0p_A_1128	1c0p	A	1135	1142	LSVHAPKY	EE--HHHH	bbbxaaaa
1e4m_M_382	1e4m	M	382	389	IYYYPKGI	EE--THHH	bbbbaaaa
1gnx_A_87	1gnx	A	90	97	FSLAWPRI	EE--HHHH	bbxxaaaa
1ihn_A_39	1ihn	A	40	47	TPRRKEIS	EE--HHHH	bxxxaaaa
1ire_B_166	1ire	B	175	182	AYIYPDTA	EE--HHHH	xbpxaaaa
1j1n_A_389	1j1n	A	389	396	FWQDYDYE	EE--HHHH	bbxbaaaa
1j9m_A_56	1j9m	A	57	64	VTIQKAYS	EE--HHHH	bxxxaaaa
1jj2_Q_78	1jj2	Q	78	85	GRYPEKAS	EE--HHHH	bbbwaaaa
2dnj_A_231	2dnj	A	231	238	APFDFQAA	EE--HHHH	bxbxaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1e4m_M_382	1e4m	M	NAGN-ACETYL-D-GLUCOSAMINE	K - 399
1ihn_A_39	1ihn	A	MSESELENOMETHIONINE	R - 42
1ihn_A_39	1ihn	A	MSESELENOMETHIONINE	S - 47
1ihn_A_39	1ihn	A	MSESELENOMETHIONINE	Y - 51
1j1n_A_389	1j1n	A	MAW4-DEOXY-D-MANNURONIC ACID	Q - 391
1j1n_A_389	1j1n	A	MAVD-MANNURONIC ACID	Q - 391
1j1n_A_389	1j1n	A	MAW4-DEOXY-D-MANNURONIC ACID	Y - 395
1j1n_A_389	1j1n	A	MAVD-MANNURONIC ACID	Y - 395
1j1n_A_389	1j1n	A	MAW4-DEOXY-D-MANNURONIC ACID	E - 396
1jj2_Q_78	1jj2	Q	MGMAGNESIUM ION	R - 79

Clusters included in this Subclass

CLUSTER: EH.1.97

CLUSTER: EH.2.170

CLUSTER: EH.3.164

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