Logo
Information on SUBCLASS 2.2.11
Subclass Accession number: 2806
Subclass: 2.2.11 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 16.7 +/- 26.4
Average RMSD (Å) : 0.600 +/- 0.141

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 225-270
Consensus Sequence: hXhpph
(φψ)-conformation: bbppaa
Pattern: [ANV]x[ILP][HPRT][DEST][AGS][LV]xx
Conservation:-0.334-0.893-0.114-0.4640.4650.9821.988-0.365-1.264
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d4d_A_3731d4d   A373381VMITEAVRGEE--HHHHHbxbpaaaaa
1ixh_*_2941ixh   -294302ASLPDSVVEEE--HHHHHxxxwaaaaa
1kko_A_1241kko   A124132NLLHTAVRYEE--HHHHHbpppaaaaa
1q5h_A_551q5h   A5967VAPRSGLAAEE--HHHHHxbxxaaaaa
1six_A_571six   A6169VHPRSGLATEE--HHHHHxbxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d4d_A_3731d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 373
1d4d_A_3731d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 374
1d4d_A_3731d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 374
1d4d_A_3731d4d   A     SINSUCCINIC ACID M - 374
1d4d_A_3731d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 375
1d4d_A_3731d4d   A     SINSUCCINIC ACID I - 375
1d4d_A_3731d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 376
1d4d_A_3731d4d   A     SINSUCCINIC ACID T - 376
1d4d_A_3731d4d   A     SINSUCCINIC ACID E - 377
1d4d_A_3731d4d   A     SINSUCCINIC ACID A - 378
1d4d_A_3731d4d   A     SINSUCCINIC ACID R - 380
1kko_A_1241kko   A     MSESELENOMETHIONINE L - 144
1kko_A_1241kko   A     MSESELENOMETHIONINE A - 145
1kko_A_1241kko   A     MSESELENOMETHIONINE S - 146
1q5h_A_551q5h   A     MGMAGNESIUM ION Y - 56
1q5h_A_551q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE V - 59
1q5h_A_551q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE P - 61
1q5h_A_551q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE R - 62
1q5h_A_551q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE S - 63
1q5h_A_551q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE G - 64
1q5h_A_551q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE L - 65
1six_A_571six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE P - 63
1six_A_571six   A     MGMAGNESIUM ION R - 64
1six_A_571six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE R - 64
1six_A_571six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE S - 65
1six_A_571six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE G - 66
1six_A_571six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE L - 67
1six_A_571six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE R - 70

Clusters included in this Subclass
CLUSTER: EH.1.139
CLUSTER: EH.3.209