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Information on SUBCLASS 4.4.1
Subclass Accession number: 281
Subclass: 4.4.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 6.7 +/- 8.9
Average RMSD (Å) : 0.960 +/- 0.288

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXhXchhX
(φψ)-conformation: aabplpbb
Pattern: x[DES]xx[EHKR]x[IKLMT][NQRT][AEKS]x[FILMY]x[DGKNQ][ALP]xxxx
Conservation:-0.6831.850-0.224-1.2421.575-0.580-0.0700.9770.863-1.0891.103-0.1740.2870.431-1.344-1.039-0.640-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dp7_P_401dp7   P4158ASFGKLIRSVFMGLRTRRHHHHHHHHHHSTT-EEEEaaaaaaaaaabxvxbbbb
1psw_A_181psw   A1834QSLYRTLQARYPQAIID.HHHHHHHHHHSTT--EE.aaaaaaaaaabxlxbbb.
1qde_A_2051qde   A205221NDVLEVTTKFMRNPVRI.HHHHHHHHHH-SS-EEE.aaaaaaaaaabblxxbb.
1vec_A_2711vec   A271287LSVQKFMNSHLEKPYEI.HHHHHHHHHH-SS-EEE.aaaaaaaaaaxblxxxb.
2shp_A_4322shp   A439456LEEVHHKQESIMDAGPVVHHHHHHHHHHSTT---EEaaaaaaaaaabpvpxpxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dp7_P_401dp7   P     EDO1,2-ETHANEDIOL S - 49
1dp7_P_401dp7   P     EDO1,2-ETHANEDIOL V - 50
1dp7_P_401dp7   P     EDO1,2-ETHANEDIOL F - 51
1dp7_P_401dp7   P     EDO1,2-ETHANEDIOL M - 52
1dp7_P_401dp7   P     PEGDI(HYDROXYETHYL)ETHER M - 52
1dp7_P_401dp7   P     PEGDI(HYDROXYETHYL)ETHER G - 53
1dp7_P_401dp7   P     PEGDI(HYDROXYETHYL)ETHER L - 54
1dp7_P_401dp7   P     PEGDI(HYDROXYETHYL)ETHER R - 55
1dp7_P_401dp7   P     EDO1,2-ETHANEDIOL T - 56
1dp7_P_401dp7   P     PEGDI(HYDROXYETHYL)ETHER T - 56
1dp7_P_401dp7   P     EDO1,2-ETHANEDIOL R - 57
1dp7_P_401dp7   P     EDO1,2-ETHANEDIOL R - 58
1psw_A_181psw   A     MSESELENOMETHIONINE Q - 18
1psw_A_181psw   A     MSESELENOMETHIONINE S - 19
1psw_A_181psw   A     MSESELENOMETHIONINE L - 20
1psw_A_181psw   A     MSESELENOMETHIONINE Y - 21
1psw_A_181psw   A     MSESELENOMETHIONINE Y - 28
1psw_A_181psw   A     MSESELENOMETHIONINE P - 29
1psw_A_181psw   A     MSESELENOMETHIONINE Q - 30
1psw_A_181psw   A     MSESELENOMETHIONINE A - 31
1psw_A_181psw   A     MSESELENOMETHIONINE I - 32
1psw_A_181psw   A     MSESELENOMETHIONINE I - 33
1psw_A_181psw   A     MSESELENOMETHIONINE D - 34
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE P - 432
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE G - 434
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE V - 435
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE L - 436
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE F - 438
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE L - 439

Clusters included in this Subclass
CLUSTER: HE.5.68