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Information on SUBCLASS 4.4.2
Subclass Accession number: 282
Subclass: 4.4.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
SCOP : 51366 (>50 %)  
 Number of loops: 5

Average sequence ID (%) : 8.3 +/- 10.9
Average RMSD (Å) : 0.780 +/- 0.259

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XphXchXh
(φψ)-conformation: aabplpbb
Pattern: [klv][eqr][AEKN]x[cik]x[DGQ][AIV]x[AIPV][dgtv]x
Conservation:-0.1300.6870.191-0.337-0.698-0.1951.2921.740-1.3330.292-1.509-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ei9_A_521ei9   A5869VEKKIPGIHVLSHHHHSTT--EEEaaaabpvpbbbx
1jlr_A_1181jlr   A121132LRAVCRGVRIGKHHHHSTT--EEEaaaabpvpxbxb
1n67_A_3221n67   A322333YVNTKDDVKATLHHHH--S-EEEEaaaabblxbbbb
1psw_A_181psw   A2434LQARYPQAIID.HHHHSTT--EE.aaaabxlxbbb.
2shp_A_4322shp   A445456KQESIMDAGPVVHHHHSTT---EEaaaabpvpxpxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jlr_A_1181jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE V - 124
1jlr_A_1181jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE C - 125
1jlr_A_1181jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE R - 126
1jlr_A_1181jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE G - 127
1jlr_A_1181jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE V - 128
1jlr_A_1181jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE R - 129
1n67_A_3221n67   A     MGMAGNESIUM ION V - 323
1n67_A_3221n67   A     MGMAGNESIUM ION N - 324
1n67_A_3221n67   A     MGMAGNESIUM ION T - 325
1n67_A_3221n67   A     MGMAGNESIUM ION K - 326
1n67_A_3221n67   A     MGMAGNESIUM ION D - 327
1psw_A_181psw   A     MSESELENOMETHIONINE Q - 18
1psw_A_181psw   A     MSESELENOMETHIONINE S - 19
1psw_A_181psw   A     MSESELENOMETHIONINE L - 20
1psw_A_181psw   A     MSESELENOMETHIONINE Y - 21
1psw_A_181psw   A     MSESELENOMETHIONINE Y - 28
1psw_A_181psw   A     MSESELENOMETHIONINE P - 29
1psw_A_181psw   A     MSESELENOMETHIONINE Q - 30
1psw_A_181psw   A     MSESELENOMETHIONINE A - 31
1psw_A_181psw   A     MSESELENOMETHIONINE I - 32
1psw_A_181psw   A     MSESELENOMETHIONINE I - 33
1psw_A_181psw   A     MSESELENOMETHIONINE D - 34
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE P - 432
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE G - 434
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE V - 435
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE L - 436
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE F - 438
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE L - 439

Clusters included in this Subclass
CLUSTER: HE.4.115
CLUSTER: HE.6.135