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Information on SUBCLASS 2.3.8
Subclass Accession number: 2820
Subclass: 2.3.8 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 59.5 +/- -6.0
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XFXXXp
(φψ)-conformation: bbapaa
Pattern: x[F]x[AK][ADS][DY][DQ][AR][AP][AG][V][D][A][HN][Y][Y][A][GK]x[T][Y][D][Y][Y][K][AN][TV][FH]
Conservation:-1.4141.024-1.564-0.888-1.066-0.815-0.382-0.888-0.730-0.5830.1281.0240.1280.2081.4721.4720.128-0.823-1.2650.5761.4721.0241.4721.4720.576-0.832-0.582-0.342
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bqb_A_581bqb   A5885NFVKDDQRAGVDANYYAKQTYDYYKNTFEE-SGGGHHHHHHHHHHHHHHHHHHHHHbxaxaaaaaaaaaaaaaaaaaaaaaaaa
1kjo_A_611kjo   A6188QFFASYDAPAVDAHYYAGVTYDYYKNVHEE-SGGGHHHHHHHHHHHHHHHHHHHHHbbaxaaaaaaaaaaaaaaaaaaaaaaaa
1npc_*_621npc   -6289VFNAAYDAAAVDAHYYAGKTYDYYKATFEE-SGGGHHHHHHHHHHHHHHHHHHHHHbbaxaaaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kjo_A_611kjo   A     CACALCIUM ION Q - 61
1kjo_A_611kjo   A     CACALCIUM ION F - 62
1kjo_A_611kjo   A     CACALCIUM ION F - 63
1kjo_A_611kjo   A     CACALCIUM ION D - 67
1npc_*_621npc   *     CACALCIUM ION V - 62
1npc_*_621npc   *     CACALCIUM ION N - 64
1npc_*_621npc   *     CACALCIUM ION D - 68

Clusters included in this Subclass
CLUSTER: EH.4.378