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Information on SUBCLASS 2.4.2
Subclass Accession number: 2825
Subclass: 2.4.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 9.6 +/- 13.7
Average RMSD (Å) : 0.812 +/- 0.146

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXpXX
(φψ)-conformation: bbpbaa
Pattern: [afgikv][alt]x[cimtv]xx[DGNRT]xxx[afikl][aekqr][aers]
Conservation:-1.4101.078-0.8731.011-1.279-0.2191.606-1.0650.088-0.093-0.5060.9110.751
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eep_A_1451eep   A145157GAAVSIDIDTIEREEEE-S-TTHHHHbbxbbxbaaaaaa
1hpl_A_451hpl   A4961FQEIVADPSTIQSEEEE-S-HHHHHHxbxbbxbaaaaaa
1kws_A_761kws   A8092VTPTYARLVQKAEEEEE--STTHHHHxbwbbxbaaaaaa
1m5w_A_681m5w   A7082NLEMAVTEEMLAIEEEE-SSHHHHHHbxxbxxbaaaaaa
1mkz_A_431mkz   A4759KAIVKENRYAIRAEEEE-S-HHHHHHbbbbxxbaaaaaa
1vi2_A_1501vi2   A152164KLFNRRDEFFDKAEEEE-SSTTHHHHbxbbxxbaaaaaa
1zfj_A_2261zfj   A226238AAAVGVTSDTFEREEEE-SSTTHHHHbbbbbbbaaaaaa
2mas_A_32mas   A618ILDCDPGLDDAVAEEEE--SHHHHHHbxbbbpbaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kws_A_761kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID T - 81
1kws_A_761kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID P - 82
1kws_A_761kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID T - 83
1kws_A_761kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID Y - 84
1kws_A_761kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID R - 86
1m5w_A_681m5w   A     DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE E - 72
1m5w_A_681m5w   A     PO4PHOSPHATE ION E - 72
1vi2_A_1501vi2   A     MSESELENOMETHIONINE E - 150
1vi2_A_1501vi2   A     MSESELENOMETHIONINE I - 151
1vi2_A_1501vi2   A     MSESELENOMETHIONINE K - 152
1vi2_A_1501vi2   A     MSESELENOMETHIONINE L - 153
1vi2_A_1501vi2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 155
1vi2_A_1501vi2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 156
1vi2_A_1501vi2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 158
1vi2_A_1501vi2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 160
2mas_A_32mas   A     CACALCIUM ION C - 9
2mas_A_32mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL D - 10
2mas_A_32mas   A     CACALCIUM ION D - 10
2mas_A_32mas   A     CACALCIUM ION P - 11
2mas_A_32mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL G - 12
2mas_A_32mas   A     CACALCIUM ION G - 12
2mas_A_32mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL D - 14
2mas_A_32mas   A     CACALCIUM ION D - 14
2mas_A_32mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL D - 15
2mas_A_32mas   A     CACALCIUM ION D - 15
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
2mas_A_32mas   A S1DESCRIPTION NOT PROVIDEDD - 10
2mas_A_32mas   A S1DESCRIPTION NOT PROVIDEDD - 15

Clusters included in this Subclass
CLUSTER: EH.4.95