Logo
Information on SUBCLASS 4.5.2
Subclass Accession number: 286
Subclass: 4.5.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 9.7 +/- 11.4
Average RMSD (Å) : 1.400 +/- 0.346

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXpPXhXh
(φψ)-conformation: aapaapab
Pattern: [PQT][AS]xx[ELM]xx[ETW]x[HMV][GNV][DKQ]xxx[ANT][DHY][P]x[LV]x[ILM][AVW]x
Conservation:-0.1250.900-0.125-0.286-0.367-0.527-0.326-0.286-0.688-0.286-0.6880.277-0.106-0.769-0.206-0.1250.3574.056-0.8490.914-0.4470.839-0.447-0.688
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cnz_A_2001cnz   A200223QSSILWREIVNDVAKTYPDVELAHHHHHHHHHHHHHHHTT-TTSEEEEaaaaaaaaaaaaaaaabaabxbbb
1g5t_A_981g5t   A102125TAACMAVWQHGKRMLADPLLDMVVHHHHHHHHHHHHHHTT-TT-SEEEaaaaaaaaaaaaaaaaxaaxabbb
1jz7_A_4331jz7   A434457PAMSERVTRMVQRDRNHPSVIIWSHHHHHHHHHHHHHHTT-TTEEEEEaaaaaaaaaaaaaaaaxaaxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g5t_A_981g5t   A     MGMAGNESIUM ION D - 127
1g5t_A_981g5t   A     ATPADENOSINE-5'-TRIPHOSPHATE D - 127
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE R - 448
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE N - 449
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE H - 450
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE P - 451

Clusters included in this Subclass
CLUSTER: HE.6.148