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Information on SUBCLASS 3.1.6
Subclass Accession number: 2878
Subclass: 3.1.6 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 8.4 +/- 11.9
Average RMSD (Å) : 0.820 +/- 0.286

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXhpXX
(φψ)-conformation: bbpppaa
Pattern: xxx[adnqrt]x[filpv][dehnpqrs]x[dekqrwy]xxx
Conservation:-1.0000.044-1.7130.2490.9660.3541.650-1.3400.163-0.9750.665-0.064
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b65_A_3551b65   A355365.LVQAIDHERLR.EE----HHHHH.bbxxpxaaaaa
1em9_A_91em9   A920PAWTPLEPKLITEEE----HHHHHwbxbxxpaaaaa
1gpe_A_1141gpe   A114124.SWTRPDKVQID.EE----HHHHH.xbbbwxaaaaa
1gpm_A_4821gpm   A483494AHWAHLPYDFLGEEE----HHHHHbbxxxxpaaaaa
1gt1_A_1121gt1   A119130FVKLNVEDEDLEEEE----HHHHHbbxxxbxaaaaa
1ixz_A_3191ixz   A321332IAIDAPDVKGREEE--S--HHHHHbxbxppxaaaaa
1l1y_A_6381l1y   A638648.VLNYHRFWHEV.EE---BHHHHH.bbbbbxaaaaa
1m9f_C_101m9f   C1021MVHQAISPRTLNEEE----HHHHHxbxbxxxaaaaa
1o65_A_1191o65   A124135SQPRSPCYKLNYEEE----THHHHabxxxwbaaaaa
1o9p_A_2561o9p   A257268VQAIDLPEAVHEEEE----HHHHHbbxbxxwaaaaa
1rif_A_1101rif   A110120.KRIEPHWYQKD.EE----HHHHH.xxbbxxaaaaa
1ry6_A_21ry6   A617VRKRPLSELEKKEEE----HHHHHbbxxxpxaaaaa
1st0_A_781st0   A8495LEKTPFQVEQVAEEE----HHHHHbbxxwxbaaaaa
1v8k_A_731v8k   A7788VRKRPLNKQELAEEE----HHHHHbbxxxxxaaaaa
1vj7_A_2371vj7   A238249VYGRPKHIYSIYEEE----HHHHHbbxbxxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpe_A_1141gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 114
1gpe_A_1141gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 115
1gpe_A_1141gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 116
1gt1_A_1121gt1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 115
1gt1_A_1121gt1   A     ANCANTHRACEN-1-YLAMINE L - 115
1gt1_A_1121gt1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE T - 116
1gt1_A_1121gt1   A     ANCANTHRACEN-1-YLAMINE T - 116
1gt1_A_1121gt1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE E - 117
1gt1_A_1121gt1   A     ANCANTHRACEN-1-YLAMINE E - 117
1gt1_A_1121gt1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 118
1gt1_A_1121gt1   A     ANCANTHRACEN-1-YLAMINE L - 118
1gt1_A_1121gt1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE F - 119
1gt1_A_1121gt1   A     ANCANTHRACEN-1-YLAMINE F - 119
1ixz_A_3191ixz   A     HGMERCURY (II) ION I - 334
1ixz_A_3191ixz   A     HGMERCURY (II) ION I - 337
1ixz_A_3191ixz   A     HGMERCURY (II) ION H - 338
1l1y_A_6381l1y   A     BGCBETA-D-GLUCOSE R - 643
1l1y_A_6381l1y   A     BGCBETA-D-GLUCOSE W - 645
1l1y_A_6381l1y   A     BGCBETA-D-GLUCOSE H - 646
1o9p_A_2561o9p   A     MLAMALONIC ACID H - 273
1o9p_A_2561o9p   A     MLAMALONIC ACID Q - 277
1st0_A_781st0   A     GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE I - 83
1st0_A_781st0   A     GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE E - 85
1st0_A_781st0   A     YT3YTTRIUM (III) ION E - 92
1v8k_A_731v8k   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER R - 78
1v8k_A_731v8k   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 79
1v8k_A_731v8k   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER R - 80
1v8k_A_731v8k   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER P - 81
1v8k_A_731v8k   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 83
1vj7_A_2371vj7   A     GDPGUANOSINE-5'-DIPHOSPHATE R - 241
1vj7_A_2371vj7   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 243
1vj7_A_2371vj7   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 251
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gt1_A_1121gt1   A PRZPRZ BINDING SITE FOR CHAIN AT - 116
1gt1_A_1121gt1   A PRZPRZ BINDING SITE FOR CHAIN AE - 117
1o9p_A_2561o9p   A AC1MLA BINDING SITE FOR CHAIN AQ - 277

Clusters included in this Subclass
CLUSTER: EH.4.55
CLUSTER: EH.5.48