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Information on SUBCLASS 3.4.4
Subclass Accession number: 2919
Subclass: 3.4.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 9.3 +/- 15.9
Average RMSD (Å) : 0.800 +/- 0.274

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XpXXpXX
(φψ)-conformation: bbappaa
Pattern: [IKLV]x[aikltv]x[hnqst]xx[DHNPQS]x[denpq]xxx[adntv]x[aftv]x
Conservation:2.7040.932-0.110-1.0811.092-0.581-0.8580.996-0.6290.768-0.8370.208-0.129-0.486-0.849-0.455-0.684
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cmi_A_71cmi   A723VIKNADMSEEMQQDSVEEEEEE-S-HHHHHHHHHbxabbaxxaaaaaaaaa
1dfm_A_901dfm   A91107LVEVQFSNYPFLLNNTVEEEE--SBTHHHHHHHHbbbbbaxxaaaaaaaaa
1elj_A_61elj   A824VVIWHAMQPNELEVFQSEEEEE---HHHHHHHHHbxbxbaxxaaaaaaaaa
1id1_A_311id1   A3147VTVISNLPEDDIKQLEQEEEEE---HHHHHHHHHbbbbbaxxaaaaaaaaa
1k0g_A_711k0g   A7187KRTTTTDDPLQVLQQVLEEEEE-S-HHHHHHHHHxbbbbaxpaaaaaaaaa
1l3l_A_461l3l   A4763ITAVTNYHRQWQSTYFDEEEEE-S-HHHHHHHHHbbbbbaxpaaaaaaaaa
1nnf_A_21nnf   A218ITVYNGQQKEAATAVAKEEEEE-S-HHHHHHHHHbbbxbaxpaaaaaaaaa
1o7t_A_21o7t   A218ITVYNGQHKEAAQAVADEEEEE-S-HHHHHHHHHbbbxbaxpaaaaaaaaa
1qas_A_3851qas   A387403LSLENHCSLEQQRVMAREEEEE---HHHHHHHHHbxxbxaxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dfm_A_901dfm   A     MSESELENOMETHIONINE T - 90
1dfm_A_901dfm   A     CACALCIUM ION T - 90
1dfm_A_901dfm   A     MSESELENOMETHIONINE L - 91
1dfm_A_901dfm   A     CACALCIUM ION E - 93
1dfm_A_901dfm   A     CACALCIUM ION V - 94
1dfm_A_901dfm   A     CACALCIUM ION Q - 95
1dfm_A_901dfm   A     CACALCIUM ION F - 96
1dfm_A_901dfm   A     CACALCIUM ION N - 105
1dfm_A_901dfm   A     MSESELENOMETHIONINE S - 109
1dfm_A_901dfm   A     MSESELENOMETHIONINE E - 110
1dfm_A_901dfm   A     MSESELENOMETHIONINE L - 111
1dfm_A_901dfm   A     MSESELENOMETHIONINE F - 112
1dfm_A_901dfm   A     CACALCIUM ION F - 112
1dfm_A_901dfm   A     MSESELENOMETHIONINE H - 113
1dfm_A_901dfm   A     CACALCIUM ION H - 113
1dfm_A_901dfm   A     MSESELENOMETHIONINE K - 114
1dfm_A_901dfm   A     MSESELENOMETHIONINE S - 115
1dfm_A_901dfm   A     CACALCIUM ION S - 115
1elj_A_61elj   A     GLCGLUCOSE A - 13
1elj_A_61elj   A     GLCGLUCOSE M - 14
1elj_A_61elj   A     GLCGLUCOSE Q - 15
1elj_A_61elj   A     GLCGLUCOSE E - 18
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE E - 28
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE Y - 29
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE M - 30
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE A - 31
1l3l_A_461l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE A - 49
1l3l_A_461l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE T - 51
1l3l_A_461l3l   A     MSESELENOMETHIONINE Y - 53
1l3l_A_461l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE Y - 53
1l3l_A_461l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE W - 57
1l3l_A_461l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE Q - 58
1l3l_A_461l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE Y - 61
1l3l_A_461l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE F - 62
1nnf_A_21nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID Q - 8
1nnf_A_21nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID Q - 9
1o7t_A_21o7t   A     HF5HF OXO CLUSTER HF5 H - 9

Clusters included in this Subclass
CLUSTER: EH.2.108
CLUSTER: EH.3.125
CLUSTER: EH.4.185