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PDB code:

Information on SUBCLASS 3.8.2

Subclass Accession number: 2952 Subclass: 3.8.2 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 10 Average sequence ID (%) : 15.6 +/- 20.0 Average RMSD (Å) : 0.760 +/- 0.227 Consensus geometry d (Å): 11 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a2z_A_35	1a2z	A	41	49	VLPVSVKRA	EE-S-HHHH	bxxxbaaaa
1hpl_A_45	1hpl	A	51	59	EIVADPSTI	EE-S-HHHH	xbbxbaaaa
1iu8_A_33	1iu8	A	37	45	ILPVSFKRA	EE-S-HHHH	bxxxbaaaa
1j8u_A_363	1j8u	A	364	372	LLPLELEKT	EEE--HHHH	bbxpbaaaa
1m5w_A_68	1m5w	A	72	80	EMAVTEEML	EE-SSHHHH	xbxxbaaaa
1mlw_A_350	1mlw	A	351	359	VKPFDPKIT	EEE--HHHH	bbxxbaaaa
1nwc_A_305	1nwc	A	307	315	VIPNDKEIT	EE-S-HHHH	xxpxbaaaa
1q8y_A_182	1q8y	A	188	196	IVRGDKVYT	EE-S-HHHH	xxpxbaaaa
1qlt_A_428	1qlt	A	428	436	IAKVSGEDA	EE-SSHHHH	bbxxbaaaa
2mas_A_3	2mas	A	8	16	DCDPGLDDA	EE--SHHHH	bbbpbaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1m5w_A_68	1m5w	A	DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE	E - 72
1m5w_A_68	1m5w	A	PO4PHOSPHATE ION	E - 72
1q8y_A_182	1q8y	A	ADPADENOSINE-5'-DIPHOSPHATE	A - 185
1q8y_A_182	1q8y	A	ADPADENOSINE-5'-DIPHOSPHATE	K - 187
1q8y_A_182	1q8y	A	ADPADENOSINE-5'-DIPHOSPHATE	E - 202
2mas_A_3	2mas	A	CACALCIUM ION	C - 9
2mas_A_3	2mas	A	PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL	D - 10
2mas_A_3	2mas	A	CACALCIUM ION	D - 10
2mas_A_3	2mas	A	CACALCIUM ION	P - 11
2mas_A_3	2mas	A	PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL	G - 12
2mas_A_3	2mas	A	CACALCIUM ION	G - 12
2mas_A_3	2mas	A	PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL	D - 14
2mas_A_3	2mas	A	CACALCIUM ION	D - 14
2mas_A_3	2mas	A	PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL	D - 15
2mas_A_3	2mas	A	CACALCIUM ION	D - 15

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
2mas_A_3	2mas	A	S1DESCRIPTION NOT PROVIDED	D - 10
2mas_A_3	2mas	A	S1DESCRIPTION NOT PROVIDED	D - 15

Clusters included in this Subclass

CLUSTER: EH.2.70

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