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Information on SUBCLASS 3.8.6
Subclass Accession number: 2956
Subclass: 3.8.6 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 13.3 +/- 15.4
Average RMSD (Å) : 1.000 +/- 0.367

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXXccpp
(φψ)-conformation: bbppbaa
Pattern: [LMVW]x[FILV][ILTV]x[GNS][DKS][KPR][esy]x[nty]x
Conservation:0.1650.4210.8890.391-1.5761.4030.9680.873-0.647-1.390-0.412-1.087
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d3y_A_2441d3y   A245256LVFTDGDPYGYLEEE--BSHHHHHxbbbpxbaaaaa
1nwc_A_3051nwc   A305316VKVIPNDKEITLEEEE-S-HHHHHxbxxpxbaaaaa
1p57_A_271p57   A2839WRLLCSSRSNAREEEEB--TTHHHbbxbxxbaaaaa
1q8y_A_1821q8y   A186197MKIVRGDKVYTEEEEE-S-HHHHHbxxxpxbaaaaa
1uu1_A_3131uu1   A314325VRITIGKREENDEEEE---HHHHHbbbxxbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d3y_A_2441d3y   A     MGMAGNESIUM ION D - 249
1d3y_A_2441d3y   A     MGMAGNESIUM ION D - 251
1d3y_A_2441d3y   A     MGMAGNESIUM ION Y - 253
1d3y_A_2441d3y   A     MGMAGNESIUM ION G - 254
1q8y_A_1821q8y   A     ADPADENOSINE-5'-DIPHOSPHATE A - 185
1q8y_A_1821q8y   A     ADPADENOSINE-5'-DIPHOSPHATE K - 187
1q8y_A_1821q8y   A     ADPADENOSINE-5'-DIPHOSPHATE E - 202
1uu1_A_3131uu1   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE R - 315
1uu1_A_3131uu1   A     HSAPHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER R - 315

Clusters included in this Subclass
CLUSTER: EH.4.148