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Information on SUBCLASS 3.13.1
Subclass Accession number: 2977
Subclass: 3.13.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 10.2 +/- 10.3
Average RMSD (Å) : 0.767 +/- 0.314

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hhXhhhX
(φψ)-conformation: bbabpaa
Pattern: [aily][flv][AILVY][imv]x[LTV][apw][apvy]x[efhq]x[ADGKS][degt][afiv][aiv][ekl][ersy][AKLM][aefk]
Conservation:-0.7400.6440.7891.625-0.5472.428-0.388-1.124-1.402-0.520-1.2510.230-0.2880.2820.7480.381-0.1460.400-1.124
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dpg_A_1121dpg   A113131IFYMSVAPRFFGTIAKYLKEEEE-S-GGGHHHHHHHHHbbbxabpaaaaaaaaaaaa
1h6d_A_1531h6d   A153171AVYIILPNSLHAEFAIRAFEEEE-S-GGGHHHHHHHHHbbbxabwaaaaaaaaaaaa
1ks9_A_661ks9   A6684LLLVTLKAWQVSDAVKSLAEEEE-S-GGGHHHHHHHHHbbbbaxxaaaaaaaaaaaa
1nat_*_771nat   -7795RVIIMTAYGELDMIQESKEEEEEEE-TT-HHHHHHHHHbbbxbbxaaaaaaaaaaaa
1pj5_A_3541pj5   A355373YVAEAVWVTHSAGVAKAMAEEEES--GGGHHHHHHHHHbbbbvbxaaaaaaaaaaaa
2scu_A_672scu   A6785ASVIYVPAPFCKDSILEAIEEEE---GGGHHHHHHHHHbbbbabwaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 155
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 156
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 157
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 158
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 159
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 160
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 162
1h6d_A_1531h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE H - 163
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 357
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 358
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 359
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 360
1pj5_A_3541pj5   A     ACTACETATE ION W - 361
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 361
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 362
1pj5_A_3541pj5   A     ACTACETATE ION T - 363
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 363
1pj5_A_3541pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 364
2scu_A_672scu   A     COACOENZYME A I - 70
2scu_A_672scu   A     COACOENZYME A Y - 71
2scu_A_672scu   A     COACOENZYME A V - 72
2scu_A_672scu   A     COACOENZYME A P - 73
2scu_A_672scu   A     COACOENZYME A A - 74
2scu_A_672scu   A     COACOENZYME A F - 76
2scu_A_672scu   A     COACOENZYME A D - 79
2scu_A_672scu   A     COACOENZYME A S - 80
2scu_A_672scu   A     COACOENZYME A E - 83

Clusters included in this Subclass
CLUSTER: EH.5.61