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Information on SUBCLASS 3.24.1
Subclass Accession number: 2998
Subclass: 3.24.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 63.3 +/- 13.6
Average RMSD (Å) : 0.425 +/- 0.050

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: hGGAKVX
(φψ)-conformation: bbeabaa
Pattern: [FLY][ALV][AV][IV][LV][G][G][A][K][V][AS][D][K][I][GQ][LV][IL][DEN][NS][LM]
Conservation:-0.813-1.543-1.046-0.021-0.6771.7201.7200.3211.0210.321-0.6961.7201.0210.321-1.246-0.704-0.344-0.616-0.239-0.221
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
16pk_*_21116pk   -211230LVAIVGGAKVSDKIQLLDNMEEEEE-SS-SGGGHHHHHHHbbbbbbeabaaaaaaaaaaa
1hdi_A_2071hdi   A207226FLAILGGAKVADKIQLINNMEEEEE--S-SGGGHHHHHHHbbbbbbeaxaaaaaaaaaaa
1qpg_*_2051qpg   -205224FLAILGGAKVADKIQLIDNLEEEEE-SS-SGGGHHHHHHHxbbxbbeabaaaaaaaaaaa
1v6s_A_1861v6s   A186205YAVVLGGAKVSDKIGVIESLEEEEE--S-GGGTHHHHHHHbbbbbbeabaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
16pk_*_21116pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 216
16pk_*_21116pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 217
16pk_*_21116pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER A - 218
16pk_*_21116pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER K - 219
16pk_*_21116pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER D - 222
16pk_*_21116pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER K - 223
1hdi_A_2071hdi   A     AMPADENOSINE MONOPHOSPHATE G - 212
1hdi_A_2071hdi   A     AMPADENOSINE MONOPHOSPHATE G - 213
1hdi_A_2071hdi   A     AMPADENOSINE MONOPHOSPHATE A - 214
1hdi_A_2071hdi   A     AMPADENOSINE MONOPHOSPHATE K - 215
1hdi_A_2071hdi   A     AMPADENOSINE MONOPHOSPHATE D - 218
1hdi_A_2071hdi   A     AMPADENOSINE MONOPHOSPHATE K - 219
1qpg_*_2051qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 210
1qpg_*_2051qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 211
1qpg_*_2051qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE A - 212
1qpg_*_2051qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE K - 213
1qpg_*_2051qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE K - 217
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hdi_A_2071hdi   A AMPAMP BINDING SITEA - 214
1hdi_A_2071hdi   A AMPAMP BINDING SITEK - 215
1hdi_A_2071hdi   A AMPAMP BINDING SITEK - 219

Clusters included in this Subclass
CLUSTER: EH.7.80