|
|
|
|
|
|
|
| Information on SUBCLASS 0.1.3 |
|
Subclass Accession number: 3
Subclass: 0.1.3 
Type: HE alpha-beta DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 25 Average sequence ID (%) : 6.8 +/- 12.3 Average RMSD (Å) : 0.504 +/- 0.172 Consensus geometry
|
| Consensus Sequence: | XXXX |
| (φψ)-conformation: | aabb |
| Pattern: | x | x | [adgknqrst] | x | x | x |
| Conservation: | -0.941 | 0.063 | 1.260 | -1.330 | 0.864 | 0.085 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1b0u_A_85 | 1b0u | A | 91 | 96 | LRTRLT | HHHHEE | aaaabb |
| 1c1k_A_181 | 1c1k | A | 193 | 198 | YRKILN | HHHHEE | aaaaxx |
| 1dl2_A_451 | 1dl2 | A | 464 | 469 | FENTCV | HHHHEE | aaaaxb |
| 1elj_A_96 | 1elj | A | 99 | 104 | QDAMQY | HHHTEE | aaaabb |
| 1fp3_A_238 | 1fp3 | A | 239 | 244 | CLGRHQ | HHHHEE | aaaaxb |
| 1g6s_A_416 | 1g6s | A | 420 | 425 | LARISQ | HHHHEE | aaaaxb |
| 1grj_*_46 | 1grj | - | 68 | 73 | KLSNAQ | HHHHEE | aaaapb |
| 1hbn_B_33 | 1hbn | B | 41 | 46 | GIKRTV | HHHHEE | aaaabb |
| 1hc7_A_377 | 1hc7 | A | 400 | 405 | REDHTR | HHHTEE | aaaabb |
| 1hnn_A_140 | 1hnn | A | 147 | 152 | LRARVK | HHHHEE | aaaaxa |
| 1hsj_A_91 | 1hsj | A | 94 | 99 | WDAVRY | HHHTEE | aaaabb |
| 1ivy_A_202 | 1ivy | A | 209 | 214 | QTHCCS | HHHHEE | aaaabb |
| 1j7n_A_33 | 1j7n | A | 40 | 45 | MKHIVK | HHHHEE | aaaabb |
| 1lp8_A_209 | 1lp8 | A | 216 | 221 | IFGDCK | HHHSEE | aaaabb |
| 1mrj_*_43 | 1mrj | - | 43 | 48 | GSQRYA | HHHHEE | aaaabb |
| 1nd7_A_809 | 1nd7 | A | 812 | 817 | WQRNTV | HHHTEE | aaaabb |
| 1nlf_A_96 | 1nlf | A | 102 | 107 | VADGLL | HHHHEE | aaaabb |
| 1nm8_A_366 | 1nm8 | A | 382 | 387 | MIQDLD | HHHHEE | aaaaxb |
| 1nxc_A_564 | 1nxc | A | 578 | 583 | ESHCRV | HHHTEE | aaaaxb |
| 1pzx_A_143 | 1pzx | A | 153 | 158 | YCRHME | HHHTEE | aaaaxb |
| 1qhl_A_132 | 1qhl | A | 133 | 138 | TQLVTE | HHHHEE | aaaabb |
| 1tca_*_13 | 1tca | - | 16 | 21 | LDAGLT | HHHTEE | aaaabb |
| 1umz_A_234 | 1umz | A | 244 | 249 | RQKYTI | HHHTEE | aaaaxa |
| 1un8_A_172 | 1un8 | A | 182 | 187 | AASNTF | HHHTEE | aaaabb |
| 3thi_A_93 | 3thi | A | 96 | 101 | LQGAKR | HHHTEE | aaaabb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1nxc_A_564 | 1nxc | A | NAGN-ACETYL-D-GLUCOSAMINE | W - 569 |
| 1pzx_A_143 | 1pzx | A | PLMPALMITIC ACID | H - 159 |
| 1pzx_A_143 | 1pzx | A | PLMPALMITIC ACID | F - 161 |
| 1umz_A_234 | 1umz | A | XYSXYLOPYRANOSE | K - 246 |
| 1umz_A_234 | 1umz | A | NAGN-ACETYL-D-GLUCOSAMINE | I - 249 |
| 1umz_A_234 | 1umz | A | XYSXYLOPYRANOSE | Y - 250 |
| Clusters included in this Subclass |
| CLUSTER: HE.0.1 |
| For any comment or web-related incidence, send an email to the webmaster. |
|