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Information on SUBCLASS 3.27.1
Subclass Accession number: 3002
Subclass: 3.27.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 22.7 +/- 21.0
Average RMSD (Å) : 0.450 +/- 0.093

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XpPXhXp
(φψ)-conformation: bbwbpaa
Pattern: [AV][FILMVY][IV]x[DQST][P][agtv][FWY][adpv][ehns][FHY]x[ekprst][aimv][CFILMV]x[afglt]
Conservation:0.383-0.0630.953-0.941-0.0552.591-0.6481.347-0.633-0.2171.203-1.066-0.655-0.349-0.114-0.819-0.916
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ajs_A_1331ajs   A133149VYVSSPTWENHNGVFTTEEEEES--THHHHHHHHbbbxbwbxaaaaaaaaa
1b5p_A_1171b5p   A118134VIVLSPYWVSYPEMVRFEEEEES--THHHHHHHHbxbxxwbpaaaaaaaaa
1bw0_A_1301bw0   A131147ALVPQPGFPHYETVCKAEEEEES--THHHHHHHHbxbwbwbxaaaaaaaaa
1d2f_A_1131d2f   A114130VVIHTPAYDAFYKAIEGEEEEES--HHHHHHHHHbxbxbwbxaaaaaaaaa
1gde_A_1131gde   A114130VLIPTPAFVSYAPAVILEEEEES--TTHHHHHHHbxbwbwbpaaaaaaaaa
1lc5_A_1001lc5   A101117AMIVTPGFAEYGRALAQEEEEES--THHHHHHHHbbbbbwbpaaaaaaaaa
1o4s_A_1151o4s   A116132VIVFSPVWVSYIPQIILEEEEES--TTHHHHHHHbxbbxwbxaaaaaaaaa
2ay1_A_1332ay1   A133149VFVSDPTWPNHVSIMNFEEEEES--HHHHHHHHHbbbxbwbxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID W - 140
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID E - 141
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID N - 142
1ajs_A_1331ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID H - 143
1b5p_A_1171b5p   A     PO4PHOSPHATE ION W - 125
1b5p_A_1171b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE W - 125
1b5p_A_1171b5p   A     PO4PHOSPHATE ION V - 126
1b5p_A_1171b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 128
1bw0_A_1301bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) F - 138
1bw0_A_1301bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) Y - 141
1d2f_A_1131d2f   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 121
1d2f_A_1131d2f   A     PLPPYRIDOXAL-5'-PHOSPHATE F - 124
1gde_A_1131gde   A     GLUGLUTAMIC ACID F - 121
1gde_A_1131gde   A     PLPPYRIDOXAL-5'-PHOSPHATE F - 121
1gde_A_1131gde   A     GLUGLUTAMIC ACID V - 122
1gde_A_1131gde   A     GLUGLUTAMIC ACID S - 123
1gde_A_1131gde   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 124
1lc5_A_1001lc5   A     PIHYDROGENPHOSPHATE ION F - 108
1lc5_A_1001lc5   A     PIHYDROGENPHOSPHATE ION A - 109
1o4s_A_1151o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE W - 123
1o4s_A_1151o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 126
2ay1_A_1332ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE W - 140
2ay1_A_1332ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 143

Clusters included in this Subclass
CLUSTER: EH.4.66