Logo
Information on SUBCLASS 4.2.2
Subclass Accession number: 3040
Subclass: 4.2.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 11.1 +/- 15.0
Average RMSD (Å) : 0.656 +/- 0.295

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hXXXXpXX
(φψ)-conformation: bpaappaa
Pattern: x[acfgilvy][degnps]x[adegknqt]x[dhknpqst]xx[dekqrsw][afikltv]x
Conservation:0.0871.178-0.506-1.279-0.294-0.4270.983-1.254-0.8871.9380.591-0.129
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4i_A_661a4i   A7182KLPRTTTESEVMEE-TT--HHHHHbxxaaxbaaaaa
1a9x_B_17141a9x   B17181729IVPAQTSAEDVLEEETT--HHHHHxbwaapxaaaaa
1b7y_B_7011b7y   B701711.VPAPTPYGEVE.EESSS-HHHHH.bpaapxaaaaa
1cr1_A_3371cr1   A339350LAMLEESVEETAEEESSS-HHHHHbbbaaxxaaaaa
1dqn_A_1981dqn   A198209LFDINLSESEVTEEESSS-HHHHHxbbaaxxaaaaa
1ei6_A_2921ei6   A296307YLRDAVPQRDAIEE-TTS-HHHHHbbxaaxxaaaaa
1eo6_A_481eo6   A5061LVPSDITVAQFMEEETTSBHHHHHbbpaaxxaaaaa
1ffv_C_691ffv   C7182VIGAMTVENDLIEEETT-BHHHHHbbxaaxxaaaaa
1fiq_B_2961fiq   B298309SFGAACALSSVEEEETT-BHHHHHbbxaapxaaaaa
1g61_A_22071g61   A22082219VVGGDTTGPELLEEETT--HHHHHbbpaapxaaaaa
1g62_A_2041g62   A205216VTGLDTTAPELSEEETT--HHHHHbbxaapxaaaaa
1gnu_A_481gnu   A5061LVPSDLTVGQFYEEETT-BHHHHHbbxaaxxaaaaa
1h4r_A_321h4r   A3647NCEMKWKGKDLFEEETT-BHHHHHxxpaaxxaaaaa
1hsk_A_1101hsk   A112123IAGSGAAIIDVSEEETTSBHHHHHbbxaaxxaaaaa
1i19_A_1591i19   A161172TAGAGASIEAIVEEETTSBHHHHHbbxaaxxaaaaa
1m1n_A_3731m1n   A377388TGYEFAHNDDYDEEESS--HHHHHbbbaNxbaaaaa
1m1n_B_3891m1n   B393404ILCHNGNKRWKKEEETT--HHHHHbbbaaxbaaaaa
1n62_C_691n62   C7182VIGAMTTQHALIEEETT-BHHHHHbbxaaxxaaaaa
1nbw_A_1331nbw   A136147LIDDAVDFLDAVEE-SSS-HHHHHxbxaabpaaaaa
1nfp_*_921nfp   -93104LFKWDDSQQKRIEE-TTS-HHHHHbxxaaxxaaaaa
1pvm_A_151pvm   A1526TVNWNTTVFDAVEEETT-BHHHHHbbxaaxxaaaaa
1qgu_B_3851qgu   B389400ILSHNANKRWQKEEETT--HHHHHbbbaaxbaaaaa
1uxy_*_781uxy   -8293HVGAGENWHRLVEEETTSBHHHHHbbpaaxxaaaaa
1vj0_A_1491vj0   A151162KVSEKDDLDVLAEE-TTS-HHHHHxbbaaxxaaaaa
1ypr_A_941ypr   A99110HYPPTVQAGEATEE-TTS-HHHHHbbxaabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ffv_C_691ffv   C     FADFLAVIN-ADENINE DINUCLEOTIDE A - 74
1ffv_C_691ffv   C     FADFLAVIN-ADENINE DINUCLEOTIDE M - 75
1ffv_C_691ffv   C     FADFLAVIN-ADENINE DINUCLEOTIDE E - 78
1fiq_B_2961fiq   B     FADFLAVIN-ADENINE DINUCLEOTIDE A - 301
1fiq_B_2961fiq   B     FADFLAVIN-ADENINE DINUCLEOTIDE A - 302
1fiq_B_2961fiq   B     FADFLAVIN-ADENINE DINUCLEOTIDE L - 305
1gnu_A_481gnu   A     NINICKEL (II) ION K - 66
1gnu_A_481gnu   A     NINICKEL (II) ION R - 67
1hsk_A_1101hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 115
1i19_A_1591i19   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 164
1i19_A_1591i19   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 165
1m1n_A_3731m1n   A     CACALCIUM ION E - 380
1m1n_A_3731m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID E - 380
1m1n_A_3731m1n   A     CFNFE(7)-MO-S(9)-N CLUSTER E - 380
1m1n_A_3731m1n   A     CACALCIUM ION F - 381
1m1n_A_3731m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID F - 381
1m1n_A_3731m1n   A     CFNFE(7)-MO-S(9)-N CLUSTER F - 381
1n62_C_691n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 78
1qgu_B_3851qgu   B     MO5MAGNESIUM ION, 5 WATERS COORDINATED N - 403
1qgu_B_3851qgu   B     MO5MAGNESIUM ION, 5 WATERS COORDINATED L - 406
1qgu_B_3851qgu   B     MO5MAGNESIUM ION, 5 WATERS COORDINATED D - 407
1qgu_B_3851qgu   B     MO5MAGNESIUM ION, 5 WATERS COORDINATED A - 408
1uxy_*_781uxy   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 85

Clusters included in this Subclass
CLUSTER: EH.3.41
CLUSTER: EH.4.212
CLUSTER: EH.4.35
CLUSTER: EH.5.26
CLUSTER: EH.5.414