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Information on SUBCLASS 4.2.8
Subclass Accession number: 3046
Subclass: 4.2.8 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.1 (>75 %)  4.1.2 (>75 %)  4.1.2.4
GO : GO:0004139 (>75 %)  GO:0016829 (>75 %)  GO:0016830 (>75 %)  GO:0016832 (>75 %)  
SCOP : 51569 (>75 %)  51570 (>75 %)  51734 (>75 %)  51735 (>75 %)  51751 (>75 %)  55468 (>75 %)  55469 (>75 %)  55470 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 10.8 +/- 15.5
Average RMSD (Å) : 1.250 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hchpXXXX
(φψ)-conformation: bbaappaa
Pattern: [DST]x[ITY][LPT][LVY][DNS][DGPV][DNRT]x[NPT]x[AET][DEK]xx[AKNQ]x[CILV]x[EQT]
Conservation:0.911-1.154-0.131-0.5550.5251.725-1.383-0.084-1.2300.476-1.4600.1731.803-0.172-1.230-0.2370.6970.756-0.5431.114
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jcl_A_151jcl   A1635DLTTLNDDDTDEKVIALCHQEEE---TT--HHHHHHHHHHxxbbbbaaxbaaaaaaaaaa
1mg5_A_571mg5   A5978TFYPYDVTVPIAETTKLLKTEEEE--TTS-HHHHHHHHHHbbbwbbaaxxaaaaaaaaaa
1n7k_A_251n7k   A2645DSTLLSPRATEEDVRNLVREEEE---TT--HHHHHHHHHHxxbbbbaapbaaaaaaaaaa
1ooe_A_431ooe   A4362SNILVDGNKNWTEQEQSILEEEEE--TTS-HHHHHHHHHHbbbxbxaaxxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jcl_A_151jcl   A     HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE D - 16
1jcl_A_151jcl   A     HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE T - 18
1jcl_A_151jcl   A     HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE L - 20
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 63
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 64
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 65
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 66

Clusters included in this Subclass
CLUSTER: EH.7.73