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Information on SUBCLASS 4.5.4
Subclass Accession number: 3068
Subclass: 4.5.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0030151 (>50 %)  GO:0046914 (>50 %)  
SCOP : 53705 (>50 %)  53706 (>50 %)  53707 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 10.3 +/- 19.4
Average RMSD (Å) : 0.867 +/- 0.306

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXhXcpXp
(φψ)-conformation: bpppapaa
Pattern: xx[DPS][ILV]x[DG][DQ][DNP][NR][AFV]x[GR][AGY]
Conservation:-0.611-1.178-0.1571.090-0.9511.1721.2380.0691.509-0.725-1.1780.560-0.838
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_3291aa6   -329341VNPVRGQNNVQGAEEE--SBTTHHHHbbxxxapaaaaaa
1k32_A_8441k32   A848860MIDILDDDRFIRYEEE-BS--HHHHHxbxxxabaaaaaa
2nap_A_3392nap   A340352SFSLTGQPNACGGEEE---STTHHHHbbxxxaxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_3291aa6   *     CSESELENOCYSTEINE V - 332
1aa6_*_3291aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE V - 332
1aa6_*_3291aa6   *     CSESELENOCYSTEINE R - 333
1aa6_*_3291aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE R - 333
1aa6_*_3291aa6   *     4MOMOLYBDENUM(IV) ION R - 333
1aa6_*_3291aa6   *     CSESELENOCYSTEINE G - 334
1aa6_*_3291aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE G - 334
1aa6_*_3291aa6   *     4MOMOLYBDENUM(IV) ION G - 334
1aa6_*_3291aa6   *     CSESELENOCYSTEINE Q - 335
1aa6_*_3291aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Q - 335
1aa6_*_3291aa6   *     4MOMOLYBDENUM(IV) ION Q - 335
1aa6_*_3291aa6   *     CSESELENOCYSTEINE V - 338
2nap_A_3392nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE L - 343
2nap_A_3392nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE T - 344
2nap_A_3392nap   A     MOMOLYBDENUM ATOM G - 345
2nap_A_3392nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE G - 345
2nap_A_3392nap   A     MOMOLYBDENUM ATOM Q - 346
2nap_A_3392nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Q - 346

Clusters included in this Subclass
CLUSTER: EH.5.344