Logo
Information on SUBCLASS 4.6.4
Subclass Accession number: 3074
Subclass: 4.6.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 10.0 +/- 11.5
Average RMSD (Å) : 1.183 +/- 0.360

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXXpXp
(φψ)-conformation: bbapapaa
Pattern: [glv][AFLV]xx[acdt][aegst][DGTV][DGNS]x[sty]xx[ael]x[al][akn][aekrs][acgly]
Conservation:-0.9001.535-0.683-1.044-0.159-0.0970.8322.104-0.9091.243-0.423-1.180-0.5110.0981.1830.0970.038-1.225
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e5x_A_1861e5x   A186203GVGCASTGDTSAALSAYCEEEE---SHHHHHHHHHHebbbabaxaaaaaaaaaa
1f74_A_1601f74   A162179GVKFTAGDFYLLERLKKAEEEE--S-HHHHHHHHHHebxxapabaaaaaaaaaa
1gqi_A_321gqi   A3249HLHVAGDSPTINAAAAELEEEE---SHHHHHHHHHHbbbbaxNxaaaaaaaaaa
1jw9_B_1241jw9   B124141LVLDCTDNVAVRNQLNAGEEEE--SSHHHHHHHHHHbbbxaxabaaaaaaaaaa
1l1s_A_41l1s   A724VFHIDEDDESRVLLLISNEEEE----HHHHHHHHHHbxbbabaxaaaaaaaaaa
1uc8_A_511uc8   A5168VALERCVSQSRGLAAARYEEEE--SSHHHHHHHHHHbbbxaxaxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e5x_A_1861e5x   A     MSESELENOMETHIONINE A - 190
1e5x_A_1861e5x   A     MSESELENOMETHIONINE D - 194
1e5x_A_1861e5x   A     MSESELENOMETHIONINE T - 195
1e5x_A_1861e5x   A     MSESELENOMETHIONINE S - 196
1e5x_A_1861e5x   A     MSESELENOMETHIONINE A - 198
1e5x_A_1861e5x   A     MSESELENOMETHIONINE L - 199
1e5x_A_1861e5x   A     MSESELENOMETHIONINE A - 201
1e5x_A_1861e5x   A     MSESELENOMETHIONINE Y - 202
1f74_A_1601f74   A     NAY6,7,8,9-TETRAHYDROXY-5-METHYLCARBOXAMIDO-2-OXONONANOIC ACID K - 164
1f74_A_1601f74   A     NAY6,7,8,9-TETRAHYDROXY-5-METHYLCARBOXAMIDO-2-OXONONANOIC ACID T - 166
1gqi_A_321gqi   A     EDO1,2-ETHANEDIOL R - 51
1jw9_B_1241jw9   B     ZNZINC ION N - 139
1l1s_A_41l1s   A     MSESELENOMETHIONINE D - 11
1l1s_A_41l1s   A     MSESELENOMETHIONINE E - 12
1l1s_A_41l1s   A     MSESELENOMETHIONINE D - 13
1l1s_A_41l1s   A     MSESELENOMETHIONINE N - 24
1l1s_A_41l1s   A     MSESELENOMETHIONINE V - 25
1l1s_A_41l1s   A     MSESELENOMETHIONINE R - 26
1l1s_A_41l1s   A     MSESELENOMETHIONINE N - 27
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gqi_A_321gqi   A AC3EDO BINDING SITE FOR CHAIN AR - 51

Clusters included in this Subclass
CLUSTER: EH.4.165
CLUSTER: EH.5.197