Information on SUBCLASS 4.8.1 |
Subclass Accession number: 3078
Subclass: 4.8.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 13.1 +/- 14.7 Average RMSD (Å) : 0.771 +/- 0.335 Consensus geometry
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Consensus Sequence: | hXXXXXpX |
(φψ)-conformation: | bbabppaa |
Pattern: | [ailv] | [FGIL] | [ITV] | [AGPST] | [adgkn] | x | [FHIV] | x | [DEHNQR] | [aeqst] | [dhrt] | [aikl] |
Conservation: | 0.314 | 0.767 | 2.356 | 0.196 | -1.010 | -0.912 | 0.300 | -1.273 | 0.659 | -0.348 | -0.353 | -0.696 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aco_*_656 | 1aco | - | 658 | 669 | AIITKSFARIHE | EEEES-B-HHHH | bbbbabbxaaaa |
1ax4_A_125 | 1ax4 | A | 125 | 136 | VFISNFHFDTTA | EEEESS--HHHH | bbbbabxxaaaa |
1dc1_A_276 | 1dc1 | A | 278 | 289 | IFIGAAIEHSMA | EEEESS--HHHH | bbbbabbbaaaa |
1i5p_A_422 | 1i5p | A | 427 | 438 | SGVPLVIRNEDL | EEEESS--HHHH | bebxabxxaaaa |
1knw_A_97 | 1knw | A | 98 | 109 | VFTADVIDQATL | EEEES---HHHH | bxbbabbxaaaa |
1kzy_C_1801 | 1kzy | C | 1803 | 1814 | LLIADQHCRTRK | EEEESS---SHH | bxbbabxbaxaa |
1nmo_A_189 | 1nmo | A | 189 | 200 | AFITGEVSEQTI | EEEES---HHHH | bbbbabbbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ax4_A_125 | 1ax4 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | F - 132 |
1ax4_A_125 | 1ax4 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | T - 134 |
1ax4_A_125 | 1ax4 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | T - 135 |
1knw_A_97 | 1knw | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 100 |
1nmo_A_189 | 1nmo | A | FEFE (III) ION | E - 197 |
1nmo_A_189 | 1nmo | A | MSESELENOMETHIONINE | Q - 198 |
1nmo_A_189 | 1nmo | A | MSESELENOMETHIONINE | H - 201 |
1nmo_A_189 | 1nmo | A | MSESELENOMETHIONINE | S - 202 |
1nmo_A_189 | 1nmo | A | MSESELENOMETHIONINE | E - 205 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ax4_A_125 | 1ax4 | A | LPAPYRIDOXAL 5-PHOSPHATE BINDING SITE. | F - 132 |
Clusters included in this Subclass |
CLUSTER: EH.3.149 |
CLUSTER: EH.5.125 |