Information on SUBCLASS 4.20.2 |
Subclass Accession number: 312
Subclass: 4.20.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>75 %) GO : GO:0016772 (>75 %) SCOP : 53270 (>50 %) 53271 (>50 %) 53272 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 13.4 Average RMSD (Å) : 0.700 +/- 0.346 Consensus geometry
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Consensus Sequence: | XXXXhXXh |
(φψ)-conformation: | aapppabb |
Pattern: | [AES] | [AKV] | [GL] | [DRS] | [AKQ] | [DV] | [AGR] | [KM] | x | [FLV] | [AGT] | [AKS] | x | [FLY] | [AEK] | [ADE] | x | [EP] | [IL] | [ADT] | [AKV] | [IV] | [MVY] | [GT] |
Conservation: | -0.033 | -0.873 | -1.105 | -0.593 | -0.173 | -0.529 | -0.593 | 0.993 | -1.293 | 0.107 | -0.313 | -0.033 | -1.153 | 1.088 | -0.173 | -0.033 | -0.588 | 1.354 | 2.036 | -0.593 | -0.873 | 2.612 | 0.107 | 0.648 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h2e_A_31 | 1h2e | A | 31 | 54 | EKGRQDAMRLGKRLEAVELAAIYT | HHHHHHHHHHHHHTTTS--SEEEE | aaaaaaaaaaaaaaaaxxxabbbb |
1l1q_A_35 | 1l1q | A | 36 | 59 | AALDAVRKEVTAHYKDVPITKVVG | HHHHHHHHHHHHHTTTS---EEEE | aaaaaaaaaaaaaaaaxwpabbbx |
1o57_A_112 | 1o57 | A | 113 | 136 | SVLSKVGKLFASVFAEREIDVVMT | HHHHHHHHHHHHHTTTS--SEEEE | aaaaaaaaaaaaaaaaxxbabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | P - 112 |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | S - 113 |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | L - 115 |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | S - 116 |
1o57_A_112 | 1o57 | A | PG4TETRAETHYLENE GLYCOL | S - 116 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | A - 127 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | E - 128 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | R - 129 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | E - 130 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | I - 131 |
1o57_A_112 | 1o57 | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | V - 137 |
Clusters included in this Subclass |
CLUSTER: HE.6.97 |