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Information on SUBCLASS 4.39.1
Subclass Accession number: 3144
Subclass: 4.39.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 20.0 +/- 17.3
Average RMSD (Å) : 1.100 +/- 0.141

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hphhhGXc
(φψ)-conformation: bbaaaeaa
Pattern: [MVY][FIL][DE][AFLP]x[AIV][G]x[GKT][AV][ILTY]xxxx
Conservation:0.0530.3321.633-0.923-0.3570.2462.643-0.666-0.3450.529-0.445-0.923-0.813-0.776-0.187
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bwv_A_2641bwv   A266280MIDLVIGYTAIQTMAEEEGGG-HHHHHHHHbbbaaaeaaaaaaaa
1j8m_F_2151j8m   F219233VIDASIGQKAYDLASEEEGGGGGGHHHHHHbbxaaaeaaaaaaaa
1nw6_A_2451nw6   A246260VLDFFAGSGVTARVAEEETT-TTTHHHHHHbbbaaaeavaaaaaa
2dpm_A_392dpm   A3953YFEPFVGGGALFFDLEEETT-TT-HHHHHHbbbaaaeavaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bwv_A_2641bwv   A     KCXLYSINE NZ-CARBOXYLIC ACID M - 266
1nw6_A_2451nw6   A     SFGADENOSYL-ORNITHINE F - 249
1nw6_A_2451nw6   A     SFGADENOSYL-ORNITHINE F - 250
1nw6_A_2451nw6   A     SFGADENOSYL-ORNITHINE A - 251
1nw6_A_2451nw6   A     SFGADENOSYL-ORNITHINE G - 252
1nw6_A_2451nw6   A     SFGADENOSYL-ORNITHINE S - 253
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE E - 41
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE P - 42
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE F - 43
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE V - 44
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE G - 45
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE G - 46
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE G - 47
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE A - 48
2dpm_A_392dpm   A     SAMS-ADENOSYLMETHIONINE L - 49

Clusters included in this Subclass
CLUSTER: EH.5.242