Information on SUBCLASS 4.39.1 |
Subclass Accession number: 3144
Subclass: 4.39.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 20.0 +/- 17.3 Average RMSD (Å) : 1.100 +/- 0.141 Consensus geometry
|
Consensus Sequence: | hphhhGXc |
(φψ)-conformation: | bbaaaeaa |
Pattern: | [MVY] | [FIL] | [DE] | [AFLP] | x | [AIV] | [G] | x | [GKT] | [AV] | [ILTY] | x | x | x | x |
Conservation: | 0.053 | 0.332 | 1.633 | -0.923 | -0.357 | 0.246 | 2.643 | -0.666 | -0.345 | 0.529 | -0.445 | -0.923 | -0.813 | -0.776 | -0.187 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bwv_A_264 | 1bwv | A | 266 | 280 | MIDLVIGYTAIQTMA | EEEGGG-HHHHHHHH | bbbaaaeaaaaaaaa |
1j8m_F_215 | 1j8m | F | 219 | 233 | VIDASIGQKAYDLAS | EEEGGGGGGHHHHHH | bbxaaaeaaaaaaaa |
1nw6_A_245 | 1nw6 | A | 246 | 260 | VLDFFAGSGVTARVA | EEETT-TTTHHHHHH | bbbaaaeavaaaaaa |
2dpm_A_39 | 2dpm | A | 39 | 53 | YFEPFVGGGALFFDL | EEETT-TT-HHHHHH | bbbaaaeavaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bwv_A_264 | 1bwv | A | KCXLYSINE NZ-CARBOXYLIC ACID | M - 266 |
1nw6_A_245 | 1nw6 | A | SFGADENOSYL-ORNITHINE | F - 249 |
1nw6_A_245 | 1nw6 | A | SFGADENOSYL-ORNITHINE | F - 250 |
1nw6_A_245 | 1nw6 | A | SFGADENOSYL-ORNITHINE | A - 251 |
1nw6_A_245 | 1nw6 | A | SFGADENOSYL-ORNITHINE | G - 252 |
1nw6_A_245 | 1nw6 | A | SFGADENOSYL-ORNITHINE | S - 253 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | E - 41 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | P - 42 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | F - 43 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | V - 44 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | G - 45 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | G - 46 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | G - 47 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | A - 48 |
2dpm_A_39 | 2dpm | A | SAMS-ADENOSYLMETHIONINE | L - 49 |
Clusters included in this Subclass |
CLUSTER: EH.5.242 |