Logo
Information on SUBCLASS 4.42.1
Subclass Accession number: 3148
Subclass: 4.42.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 29.8 +/- 25.3
Average RMSD (Å) : 0.371 +/- 0.111

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hXGXhXhX
(φψ)-conformation: bbSlpbaa
Pattern: [FIV]x[LPVY][ADGT][G][GS][ILV][GNST][AGP][ADGKS][NT][ACIY]x[dekt][ALVY][AILY]
Conservation:0.536-0.884-0.669-0.5242.6920.8640.642-0.075-0.131-0.6331.412-0.398-1.111-0.606-0.538-0.576
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fq0_A_1571fq0   A158173FCPTGGISPANYRDYLEEEBSS--TTTHHHHHbbwbSvxbaaaaaaaa
1h1y_A_1741h1y   A175190IEVDGGLGPSTIDVAAEEEESS-STTTHHHHHbbbbSvxbaaaaaaaa
1kv5_A_2081kv5   A208223ILYGGSVNGKNARTLYEEEESS--TTTHHHHHbxxbSvxbaaaaaaaa
1n55_A_2071n55   A208223ILYGGSVNAANAATLYEEEESS--TTTHHHHHbxbbSvxbaaaaaaaa
1pii_*_4021pii   -402417VLLAGGLGADNCVEAAEEEESS--TTTHHHHHbbxbSvxbaaaaaaaa
1rpx_A_1811rpx   A182197IEVDGGVGPKNAYKVIEEEESS--TTTHHHHHbbbbSvxbaaaaaaaa
1tph_1_2061tph   1206221IIYGGSVTGGNCKELAEEEESS--TTTHHHHHbbbbSlxbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fq0_A_1571fq0   A     CITCITRIC ACID C - 159
1fq0_A_1571fq0   A     CITCITRIC ACID T - 161
1fq0_A_1571fq0   A     CITCITRIC ACID G - 162
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID G - 211
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID G - 212
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID S - 213
1kv5_A_2081kv5   A     PGA2-PHOSPHOGLYCOLIC ACID V - 214
1pii_*_4021pii   *     PO4PHOSPHATE ION A - 405
1pii_*_4021pii   *     PO4PHOSPHATE ION G - 406
1pii_*_4021pii   *     PO4PHOSPHATE ION G - 407
1pii_*_4021pii   *     PO4PHOSPHATE ION L - 408
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID G - 209
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID G - 210
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID S - 211
1tph_1_2061tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID V - 212
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h1y_A_1741h1y   A SO1SO4 BINDING SITE FOR CHAIN AG - 180

Clusters included in this Subclass
CLUSTER: EH.7.34