ArchDB - Biological DataBase of Protein Loops

Grup de Recerca en Informàtica Biomèdica

Information on SUBCLASS 4.50.1

Subclass Accession number: 3159
Subclass: 4.50.1

PSSM

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Rasmol PDB

Jmol PDB

Consensus coordinates:

Rasmol PDB

Jmol PDB

Number of loops: 5

Average sequence ID (%) : 25.0 +/- 29.4
Average RMSD (Å) : 0.860 +/- 0.219

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	hhhXXpXX
(φψ)-conformation:	bbgpapaa

Pattern:	x	x	[el]	[IM]	[AGLV]	[FG]	[IT]	[ekw]	[DY]	[AEG]	[EG]	[DE]	[ILMV]	[KM]	[KRS]	x	[ilm]	[EFL]	[ARST]	[LMV]	[LMV]	[an]	[EHY]	[ALM]
Conservation:	-1.105	-0.874	-0.950	1.330	-1.109	0.108	0.388	-0.880	0.397	-0.440	0.392	2.521	0.931	0.608	0.676	-1.517	-0.599	-1.067	-0.338	0.887	1.147	-1.165	0.456	0.204

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1b8a_A_226	1b8a	A	231	254	DSEMAFIEDEEEVMSFLERLVAHA	EEEEES-SSHHHHHHHHHHHHHHH	bbbbbvxabaaaaaaaaaaaaaaa
1ii2_A_172	1ii2	A	172	195	EQVILGTEYAGEMKKGILTVMFEL	EEEEES---THHHHHHHHHHHHHH	bbbbbvbaxaaaaaaaaaaaaaaa
1j3b_A_183	1j3b	A	183	206	LVLIVGTKYAGEIKKSIFTVMNYL	EEEEES---THHHHHHHHHHHHHH	bbbbbgbaxaaaaaaaaaaaaaaa
1n9w_A_215	1n9w	A	218	241	DVEMGFIADEEDLMRLEEALLAEM	EEEEES-SSHHHHHHHHHHHHHHH	xbbbbvxabaaaaaaaaaaaaaaa
1os1_A_199	1os1	A	199	222	MQLIGGTWYGGEMKKGMFSMMNYL	EEEEES---THHHHHHHHHHHHHH	bbbbbgxapaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1b8a_A_226	1b8a	A	ATPADENOSINE-5'-TRIPHOSPHATE	E - 226
1b8a_A_226	1b8a	A	ATPADENOSINE-5'-TRIPHOSPHATE	A - 227
1b8a_A_226	1b8a	A	ATPADENOSINE-5'-TRIPHOSPHATE	S - 229
1os1_A_199	1os1	A	PYRPYRUVIC ACID	Y - 207
1os1_A_199	1os1	A	PYRPYRUVIC ACID	G - 209
1os1_A_199	1os1	A	PYRPYRUVIC ACID	E - 210
1os1_A_199	1os1	A	CACALCIUM ION	K - 212
1os1_A_199	1os1	A	PYRPYRUVIC ACID	K - 212
1os1_A_199	1os1	A	CACALCIUM ION	K - 213
1os1_A_199	1os1	A	ATPADENOSINE-5'-TRIPHOSPHATE	K - 213
1os1_A_199	1os1	A	PYRPYRUVIC ACID	K - 213

Clusters included in this Subclass

CLUSTER: EH.4.149