Information on SUBCLASS 4.25.1 |
Subclass Accession number: 318
Subclass: 4.25.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.15 (>75 %) 1.15.1 (>75 %) 1.15.1.1 GO : GO:0004784 (>75 %) GO:0016721 (>75 %) SCOP : 54718 (>75 %) 54719 (>75 %) 54720 (>75 %) |
Number of loops: 8 Average sequence ID (%) : 13.5 +/- 14.7 Average RMSD (Å) : 0.675 +/- 0.287 Consensus geometry
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Consensus Sequence: | XXhXcXph |
(φψ)-conformation: | aabpgpbb |
Pattern: | x | [AILV] | [eknrty] | [adegs] | [fiklv] | x | x | [agkl] | x | [kprs] | [DGN] | [stv] | [eknst] | [ailv] |
Conservation: | -0.413 | 1.504 | -0.673 | -0.118 | -0.160 | -0.918 | -1.267 | -0.434 | -1.224 | 0.652 | 2.184 | 0.311 | -0.220 | 0.775 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amx_*_239 | 1amx | - | 239 | 252 | AITDFEKAFPGSKI | HHHHHHHHSTT-EE | aaaaaaaabpgxbb |
1ei1_A_184 | 1ei1 | A | 190 | 203 | RLRELSFLDSGVSI | HHHHHHHHSTT-EE | aaaaaaaabxvbxb |
1g66_A_23 | 1g66 | A | 25 | 38 | VVNGVLSAYPGSTA | HHHHHHHHSTT-EE | aaaaaaaabpvxbb |
1gde_A_14 | 1gde | A | 17 | 30 | KLFDIAAGMKDVIS | HHHHHHHH-TT-EE | aaaaaaaaxxvxxx |
1mtz_A_248 | 1mtz | A | 250 | 263 | VARVIHEKIAGSEL | HHHHHHHHSTT-EE | aaaaaaaaxpvxbb |
1p9l_A_81 | 1p9l | A | 86 | 99 | QVESWLVAKPNTSV | HHHHHHHTSTT-EE | aaaaaaaabxvbbb |
1pvg_A_221 | 1pvg | A | 222 | 235 | RVYDINGSVRDINV | HHHHHHHHSTT-EE | aaaaaaaaxxvbbb |
1s14_A_1181 | 1s14 | A | 1187 | 1200 | VLKAKAVLCPGVEI | HHHHHHHHSTT-EE | aaaaaaaabpgxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gde_A_14 | 1gde | A | GLUGLUTAMIC ACID | I - 15 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | R - 221 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | R - 222 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | V - 223 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | Y - 224 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | D - 225 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | R - 231 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | D - 232 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | I - 233 |
1pvg_A_221 | 1pvg | A | MSESELENOMETHIONINE | L - 237 |
Clusters included in this Subclass |
CLUSTER: HE.4.41 |