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Information on SUBCLASS 4.25.1
Subclass Accession number: 318
Subclass: 4.25.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.15 (>75 %)  1.15.1 (>75 %)  1.15.1.1
GO : GO:0004784 (>75 %)  GO:0016721 (>75 %)  
SCOP : 54718 (>75 %)  54719 (>75 %)  54720 (>75 %)  
Number of loops: 8

Average sequence ID (%) : 13.5 +/- 14.7
Average RMSD (Å) : 0.675 +/- 0.287

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXhXcXph
(φψ)-conformation: aabpgpbb
Pattern: x[AILV][eknrty][adegs][fiklv]xx[agkl]x[kprs][DGN][stv][eknst][ailv]
Conservation:-0.4131.504-0.673-0.118-0.160-0.918-1.267-0.434-1.2240.6522.1840.311-0.2200.775
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amx_*_2391amx   -239252AITDFEKAFPGSKIHHHHHHHHSTT-EEaaaaaaaabpgxbb
1ei1_A_1841ei1   A190203RLRELSFLDSGVSIHHHHHHHHSTT-EEaaaaaaaabxvbxb
1g66_A_231g66   A2538VVNGVLSAYPGSTAHHHHHHHHSTT-EEaaaaaaaabpvxbb
1gde_A_141gde   A1730KLFDIAAGMKDVISHHHHHHHH-TT-EEaaaaaaaaxxvxxx
1mtz_A_2481mtz   A250263VARVIHEKIAGSELHHHHHHHHSTT-EEaaaaaaaaxpvxbb
1p9l_A_811p9l   A8699QVESWLVAKPNTSVHHHHHHHTSTT-EEaaaaaaaabxvbbb
1pvg_A_2211pvg   A222235RVYDINGSVRDINVHHHHHHHHSTT-EEaaaaaaaaxxvbbb
1s14_A_11811s14   A11871200VLKAKAVLCPGVEIHHHHHHHHSTT-EEaaaaaaaabpgxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gde_A_141gde   A     GLUGLUTAMIC ACID I - 15
1pvg_A_2211pvg   A     MSESELENOMETHIONINE R - 221
1pvg_A_2211pvg   A     MSESELENOMETHIONINE R - 222
1pvg_A_2211pvg   A     MSESELENOMETHIONINE V - 223
1pvg_A_2211pvg   A     MSESELENOMETHIONINE Y - 224
1pvg_A_2211pvg   A     MSESELENOMETHIONINE D - 225
1pvg_A_2211pvg   A     MSESELENOMETHIONINE R - 231
1pvg_A_2211pvg   A     MSESELENOMETHIONINE D - 232
1pvg_A_2211pvg   A     MSESELENOMETHIONINE I - 233
1pvg_A_2211pvg   A     MSESELENOMETHIONINE L - 237

Clusters included in this Subclass
CLUSTER: HE.4.41